[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: pkgconfig: Include libdir in .pc files if referenced Some packages define variables in their .pc files and those variables may depend on the value of the libdir variable even if no public or private libraries are referenced in the .pc file. Walk the list of variables and check if any of them reference ${libdir} and if so, make sure to include the libdir definition as well. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Visualizations should allow for passing a Matplotlib axes instance <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? Being able to pass an axes instance allows for easily using the visualzations in subplots and other types of figures where the figure instance is already generated Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: compose does not make use of config.json for "events" daemon command. Due to https://github.com/docker/docker-py/issues/1472, compose 1.11.1 is unable to propagate the HttpHeaders from config.json on "events" commands. Compose looks for containers events when performing "docker-compose up". Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: methods for developing quantum channels Go with pr #1191 Also @chriseclectic can you make an issue for all the other future PR that you list there. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: docker-compose up --timeout does not appear to work ## Version Docker version 17.09.0-ce, build afdb6d4 docker-compose version 1.17.0-rc1, build a0f95af ## Problem Setting timeout on `docker-compose up` does not affect the shutdown timeout `docker-compose.yml` file ```yaml version: "3.3" services: test2: image: debian:9 command: nohup sleep 1000 ``` (Also tried with version 2.0, and 2.3) ``` $ docker-compose up -d --timeout 123 test2 $ docker inspect issue_test2_1 # Shows no StopTimeout set at all $ time docker-compose stop Stopping issue_test2_1 ... done real 0m11.473s user 0m0.908s sys 0m0.144s ``` (Also tried `down`) ## Expected behavior ``` $ docker run -it --rm --stop-timeout=121 --name test1 debian:9 nohup sleep 1000 $ docker inspect test1 # Show a StopTimeout of 121 set in the "Config" section $ docker stop test1 # takes the ~121 seconds ``` ## Other Using `stop_grace_period` does work when using docker-compose commands, but not docker commands, as it appears that `docker-compose stop` or `down` just re-reads the `docker-compose.yml` file at stop time, and has nothing to do with how the container was started ## Objective I am trying to set the StopTimeout in the actual container, so the daemon knows what to respect when it is shutdown (for example during a full system shutdown). Something like `stop_grace_period` doesn't help me, as that only tells `docker-compose` how long to wait, not the docker daemon. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the dagster-io/dagster codebase. Here's the problem: typo in bigquery solids.py Typo calls `biquery` instead of `bigquery`: https://github.com/dagster-io/dagster/blob/4a91c9d09b50db93e9174c93a4ada0e138e3a046/python_modules/libraries/dagster-gcp/dagster_gcp/bigquery/solids.py#L136 This causes this solid to fail when it can't find the resource. Fails with the following error: ``` dagster.core.errors.DagsterUnknownResourceError: Unknown resource `biquery. Specify `biquery` as a required resource on the compute / config function that accessed it. ``` I will make a PR to fix it. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Open ControlledGates not marked equivalent I think #4444 broke circuit equivalence with controlled gates: ```python from qiskit import QuantumCircuit from qiskit.circuit.library.standard_gates import XGate circuit = QuantumCircuit(5) circuit.append(XGate().control(4, ctrl_state='0101'), [0, 1, 2, 3, 4]) expected = QuantumCircuit(5) expected.append(XGate().control(4, ctrl_state='0101'), [0, 1, 2, 3, 4]) assert circuit == expected ``` ``` --------------------------------------------------------------------------- AssertionError Traceback (most recent call last) <ipython-input-1-27d881d6a5be> in <module> 8 expected.append(XGate().control(4, ctrl_state='0101'), [0, 1, 2, 3, 4]) 9 ---> 10 assert circuit == expected AssertionError: ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: Avoid showing tracebacks in CLI We should not be showing the user full tracebacks in CLI. - It could extend beyond the scroll limit of their terminal - It can be overwhelming I think we should follow the lead of `npm` and `yarn` and create an error file that can be easily copied into an issue or given to an administrator. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: 'clean' target fails when custom_target's output is a directory I can reproduce it with this test case: `test cases/common/131 custom target directory install` It gives the following error: ``` [1/1] 'Cleaning' FAILED: clean 'ninja' '-t' 'clean' ninja: error: remove(html): Directory not empty Cleaning... 0 files. ninja: build stopped: subcommand failed. ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Invalid keywords warning does not say which target, meson.build file, or line/col number > WARNING: Passed invalid keyword argument "install". This will become a hard error in the future. > WARNING: Passed invalid keyword argument "install_dir". This will become a hard error in the future. These warnings are quite useless because you have no idea what targets they are talking about. We should not release with this. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Support unicode characters in -f paths On Ubuntu 16.04: ``` $ docker-compose -f 就吃饭/docker-compose.yml config/home/joffrey/work/compose/compose/config/config.py:234: UnicodeWarning: Unicode equal comparison failed to convert both arguments to Unicode - interpreting them as being unequal if filenames == ['-']: Traceback (most recent call last): File "/home/joffrey/.envs/compose/bin/docker-compose", line 9, in <module> load_entry_point('docker-compose==1.11.0.dev0', 'console_scripts', 'docker-compose')() File "/home/joffrey/work/compose/compose/cli/main.py", line 64, in main command() File "/home/joffrey/work/compose/compose/cli/main.py", line 110, in perform_command handler(command, options, command_options) File "/home/joffrey/work/compose/compose/cli/main.py", line 305, in config compose_config = get_config_from_options(self.project_dir, config_options) File "/home/joffrey/work/compose/compose/cli/command.py", line 46, in get_config_from_options config.find(base_dir, config_path, environment) File "/home/joffrey/work/compose/compose/config/config.py", line 242, in find filenames = [os.path.join(base_dir, f) for f in filenames] File "/home/joffrey/.envs/compose/lib/python2.7/posixpath.py", line 73, in join path += '/' + b UnicodeDecodeError: 'ascii' codec can't decode byte 0xe5 in position 1: ordinal not in range(128) ``` On Windows: ``` docker-compose -f "C:\Users\husun\documents\visual studio 2017\Projects\测试中文\docker-compose.yml" up -d --build ERROR: compose.cli.main.main: .IOError: [Errno 22] invalid mode ('r') or filename: 'C:\\Users\\husun\\documents\\visual studio 2017\\Projects\\????\\docker-compose.yml' ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Allow nocache option for building docker storage ## Opened from the [Prefect Public Slack Community](https://join.slack.com/t/prefect-public/shared_invite/enQtNzE5OTU3OTQwNzc1LTQ5M2FkZmQzZjI0ODg1ZTBmOTc0ZjVjYWFjMWExZDAyYzBmYjVmMTE1NTQ1Y2IxZTllOTc4MmI3NzYxMDlhYWU) **will**: is there anyway to force prefect to not use docker cache when building flows using docker storage? **zachary**: Hi <@U012VDP6V3N>! It doesn't look like we support that at the moment, but it definitely looks doable! Let me open an issue for that. **zachary**: <@ULVA73B9P> open "Allow nocache option for building docker storage" Original thread can be found [here](https://prefect-community.slack.com/archives/CL09KU1K7/p1590510689004100?thread_ts=1590510689.004100&cid=CL09KU1K7). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: `fig help $cmd` fails without fig.yml file Basically… ``` $ ls -a . .. $ fig help up Can't find fig.yml. Are you in the right directory? ``` …I think `fig help $cmd` should not care if there's a `fig.yml` file in the current directory to give you help. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Vertical offsets in LaTeX output for nbconvert The following is an example of the kind of output I'm seeing: ![screen shot 2013-08-01 at 3 20 25 pm](https://f.cloud.github.com/assets/314716/893817/c2f5cf36-faad-11e2-9cc6-8b64cd224555.png) The input is systematically a few points too high, while the output is much too low. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: Trainer is using DataParallel on parallelized models ## Environment info - `transformers` version: 4.2.0 - Platform: Ubuntu 20.04 - Python version: 3.8.5 - PyTorch version (GPU?): 1.7.1 / CUDA 11.2 - Using GPU in script?: - Using distributed or parallel set-up in script?: ### Who can help @sgugger @stas00 ## Information I'm trying out the 4.2.0 release with a training script that had been working in 4.1.1. I'm parallelizing my model over two GPUs, and I had been using the `--model_parallel` training arg in the previous version. Now that it's no longer used, I removed the arg from my training command, but I'm getting an error as though the DataParallel is being used and the model isn't being detected as parallelized: `RuntimeError: module must have its parameters and buffers on device cuda:0 (device_ids[0]) but found one of them on device: cuda:1` I did some debugging, and everything seems okay with my model (`trainer. is_model_parallel` returns True). But the `trainer. args.n_gpu` is still 2. I admit that I don't totally understand what's happening in the trainer code, but it might be an error on line 289? [`self.args._n_gpu = 1`](https://github.com/huggingface/transformers/blob/126fd281bc309ec29caef99e982640265c8a4fba/src/transformers/trainer.py#L289) Should that be `self.args.n_gpu = 1`, without the leading underscore? ## To reproduce Steps to reproduce the behavior: 1. Parallelize a model 2. Train on a machine with multiple GPUs Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Lightning-AI/lightning codebase. Here's the problem: incorrect run on the test set with overwritten validation_end and test_epoch_end ## 🐛 Bug If I override validation_end and test_epoch_end, TrainerEvaluationLoopMixin.evaluate works incorrectly on the test set Suppose we override `validation_epoch_end` and `test_end`, but not `validation_end` and `test_epoch_end`. (I actually did this since I am a newbie and haven't yet figured out how everything works; also it seems `validation_end` is the same as `validation_epoch_end`, and `test_end` seems to be the same as `test_epoch_end`). Suppose I run `trainer.test(model)`. Consider lines 300-312 in [evaluation_loop.py](https://github.com/PyTorchLightning/pytorch-lightning/blob/6a0b171be4c08982a7a8b45ddffe04a726265323/pytorch_lightning/trainer/evaluation_loop.py#L300). Then we have `(test_mode and self.is_overriden('test_end', model=model)) == True`, so the first `if` block is executed, that is `eval_results = model.test_end(outputs)`. But look at the second `if` and its `elif`. We have `(test_mode and self.is_overriden('test_epoch_end', model=model)) == False`, hence the `elif` of the second `if` will also be executed, that is `eval_results = model.validation_epoch_end(outputs)`. And we will have validation results recorder as test results, which is a mistake. This problem is present in the commit 60b8246. And the inverse problem (which happens if we override only `test_epoch_end` and `validation_end` is present in 0.7.1. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: test_compiler breaks AerJob status check <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Informations - **Qiskit Terra version**: master - **Python version**: - **Operating system**: ### What is the current behavior? When running the tests, the following does not work when run *after* the `test_compiler` module: ```python backend = Aer.get_backend('qasm_simulator') job_sim = execute(qc, backend) job_sim.status() ``` ``` Traceback (most recent call last): File "/Users/paul/Desktop/Github_repos/qiskit-core/test/python/test_cpp.py", line 34, in test_aer_status job_sim.status() File "/Users/paul/Desktop/Github_repos/qiskit-core/qiskit/backends/aer/aerjob.py", line 37, in _wrapper return func(self, *args, **kwargs) File "/Users/paul/Desktop/Github_repos/qiskit-core/qiskit/backends/aer/aerjob.py", line 118, in status self.__class__.__name__)) qiskit.backends.joberror.JobError: 'Unexpected behavior of AerJob' ``` However, if run *before* that module, it works fine. This is true both when running locally and on Travis. This is blocking #975. ### Steps to reproduce the problem ### What is the expected behavior? ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: jupyter [build/labextension] install --dev-build cannot be set to false via CLI #### Describe the bug A few months ago, in #5099 the default value for the flag --dev-build was changed to True. Unfortunately, (as far as I can tell) there's no way to unset this flag via the CLI now! #### To Reproduce Steps to reproduce the behavior: 1. install jupyterlab 2. run `jupyter labextension install <any extension> --dev-build=false` 3. jupyter complains with an error: ![image](https://user-images.githubusercontent.com/43152655/48881381-f5a15300-edc9-11e8-96dc-e4e7d80dbdcf.png) #### Expected behavior Jupyter installs the extension and rebuilds in production. #### Additional context This might be a separate conversation, but I was a little surprised that the default behaviour of installing an extension was to leave me with a development build. I'm happy to leave that decision with the team though, as long as opting out is possible! Follow-up question: Is it possible to opt-out via config file? I haven't been able to work out what setting to set, or where to create a config file. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Remove removal of "sh" from path for MinGW in CMake New conan.tools.cmake CMake helper contains: ```python if is_windows_mingw: with tools.remove_from_path("sh"): self._conanfile.run(command) ``` This is no longer necessary, can be replaced by ``set(DCMAKE_SH="CMAKE_SH-NOTFOUND")``. Please remove it and add a red/green test for it. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the apache/airflow codebase. Here's the problem: DataprocCreateBatchOperator in deferrable mode doesn't reattach with deferment. ### Apache Airflow version main (development) ### What happened The DataprocCreateBatchOperator (Google provider) handles the case when a batch_id already exists in the Dataproc API by 'reattaching' to a potentially running job. Current reattachment logic uses the non-deferrable method even when the operator is in deferrable mode. ### What you think should happen instead The operator should reattach in deferrable mode. ### How to reproduce Create a DAG with a task of DataprocCreateBatchOperator that is long running. Make DataprocCreateBatchOperator deferrable in the constructor. Restart local Airflow to simulate having to 'reattach' to a running job in Google Cloud Dataproc. The operator resumes using the running job but in the code path for the non-derferrable logic. ### Operating System macOS 13.4.1 (22F82) ### Versions of Apache Airflow Providers Current main. ### Deployment Official Apache Airflow Helm Chart ### Deployment details _No response_ ### Anything else _No response_ ### Are you willing to submit PR? - [X] Yes I am willing to submit a PR! ### Code of Conduct - [X] I agree to follow this project's [Code of Conduct](https://github.com/apache/airflow/blob/main/CODE_OF_CONDUCT.md) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: interactiveshell.py misses urllib and io_open imports cf15c8f0ed4493492b50e8fccb72175157afac7c seems to have accidentally removed them. used in line 2957 and 2973 also affects 0.13.1 branch Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Clarify deprecation of Inspector.info() method In its docstring, the [IPython.core.oinspect.Inspector.info()](https://github.com/ipython/ipython/blob/355c5f3774cdfd8320505046973aa5032c93df35/IPython/core/oinspect.py#L705) method states that it was deprecated. When the text was [originally added](https://github.com/ipython/ipython/commit/3c1ce318117e6b2630f7c5d2379e6d269f98a124), the warning applied to the whole method, but in the [same PR](), it was [modified](https://github.com/ipython/ipython/commit/9412553b1d12e84ea7155044e775432bbee164b7) to only warn when the unused `formatter` argument was passed. However, the deprecation notice was not updated, and remained unclear as to what was deprecated, why, and what to replace it with. Of note, the deprecation was done in one of the original PRs that added Docrepr/Sphixify to IPython. As the current de-facto maintainer of Docrepr, which is now being revitalized and heavily used in Jupyter Notebook, I was surprised to see that the `Inspector.info()` heavily used in the Docrepr test suite, with no indicated replacement, and unlike the internal-only method it wraps, it was not documented. This led me on a wild goose chase to figure out what was going on. It looks like only the `formatter` arg should be deprecated, and the docstring clarified to reflect that (and perhaps the much more useful `_info` docstring merged? If not, the docstring should ideally be clarified as to the scope and reason for the deprecation, and what users should replace it with. Happy to submit a PR if/when there is clear indication of what this should say. Thanks! Created as a new issue per request of @carreau _Originally posted by @CAM-Gerlach in https://github.com/ipython/ipython/issues/10511#issuecomment-995437839_ Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Support CMake Interface libraries [Some](https://github.com/skypjack/entt) header-only C++ projects use CMake [interface libraries](https://cmake.org/cmake/help/latest/command/add_library.html#interface-libraries), which [do not currently appear to be supported by meson](https://github.com/mesonbuild/meson/blob/5bd21a96b89efc5fe96025398151dcbce34345ac/mesonbuild/cmake/interpreter.py#L71). It would be nice if they were supported. Adding `'INTERFACE_LIBRARY': 'static_library',` to `target_type_map` works, but creates an extra empty library. `build_target` or `declare_dependency` seem like better choices than `static_library`, but neither work as just a one-line edit. `build_target` requires `target_type`, which is some effort to plumb in and doesn't have a `none` option, and `declare_dependency` gets passed the normal name and (empty) sources, which it can't use. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: NBconvert fails with unicode errors when `--stdout` and file redirection is specified and HTML entities are present I'm not sure if this is a bug, but we just got caught by this in:https://github.com/swcarpentry/bc/pull/163 To reproduce, create an IPython Notebook with any HTML entity such as: `×` Then try running nbconvert with --stdout with output to a file. ``` ipython nbconvert --stdout test.ipynb > test.html ``` This will break, although: ``` ipython nbconvert --stdout test.ipynb ``` and ``` ipython nbconvert test.ipynb ``` both work. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: docker-compose create Possibility to just create but not run containers. This would be a useful feature for systemd based startups. Using gelf log driver and lose the ability to `fig run <container> bash` Im using `gelf` logging in my docker-compose file and I lose the ability to use `fig run <container> bash` because it gives the error "Error attaching: configured logging reader does not support reading". An example config is: ``` my_container: image: link-to-image log_driver: "gelf" log_opt: gelf-address: udp://0.0.0.0:12201 gelf-tag: my_container ``` I understand that I lose the ability to use `docker-compose logs` or `docker-compose logs my_container` but I would expect `docker-compose run my_container bash` to let me into the container as I am overriding the CMD line manually. ``` docker-compose version: 1.5.1 Docker version 1.9.0, build 76d6bc9 ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: '_' makes matplotlib to render the following character as subscript ### Environment - **Qiskit Terra version**: 0.19.1 - **Python version**: 3.9.9 - **Operating system**: Linux(Fedora 34) ### What is happening? The '_' in the name of QuantumRegister forces the following character to be rendered as subscript In this example see the 'r' is rendered as a subscript. ![issue_01012022](https://user-images.githubusercontent.com/54737489/147839273-e1afa3b0-4b36-4cf5-9c77-8256223eb666.png) The problem vanishes when the number of qubits is increased to 2 or more. ![issue_01012022_4](https://user-images.githubusercontent.com/54737489/147839502-27cd3634-d237-4f65-bb28-81522044d4f8.png) ### How can we reproduce the issue? from qiskit import QuantumRegister, QuantumCircuit num_of_qubits=1 q_reg=QuantumRegister(num_of_qubits, 'q_reg') qc=QuantumCircuit(q_reg) qc.draw(output='mpl') ### What should happen? This should be the output: ![issue_01012022_3](https://user-images.githubusercontent.com/54737489/147839433-fab0ef9f-7e72-4d0f-9518-c35f88572162.png) ### Any suggestions? _No response_ Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Firestore: Non-existing Documents Calls to `DocumentSnapshot.to_dict()` for non-existing documents should return `None` and not an empty dictionary. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Qtconsole - nonstandard \a and \b Issue #1089 reported lack of support for \b (backspace) and \r (return) PR #629 purported to fix these, and did fix \r, but it mapped \b to bell rather than to backspace. The standard mapping for bell is \a. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conda/conda codebase. Here's the problem: [4.6.0b0] MalformedVersionError Since 4.6.0b0 didn't seem to work with my conda build I attempted to downgrade to the latest stable but got an error! ``` λ conda install conda=4.5.11 Collecting package metadata: failed MalformedVersionError: Malformed version string '~': invalid character(s) ``` conda 4.6.0b0 spec containing != ``` >>> h = History("/Users/kfranz/continuum/conda/devenv") >>> print(yaml_dump(sorted(str(s) for s in h.get_requested_specs_map().values()))) ... - pytest==!=3.7.3 ... ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: `&` and `|` operators don't work for `float32` arguments Example: ```python a = jnp.array([0.0, 1.0]) b = a | a ``` results in ` RuntimeError: Invalid argument: Expected pred or integral type in argument to and/or operation; got F32.` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: Do not package js sourcemaps by default In https://github.com/conda-forge/jupyterlab-feedstock/issues/155, @jcrist suggested not packaging the js sourcemap files since they are quite large. I agree. It would be great if we could delete those files from the stock package. If people want them back, they can install node and do a simple `jupyter lab build`. Deleting the map files from the 1.0.6 wheel seemed to shrink the wheel from about 16M to about 6.5M, so it is a huge savings. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Fully functional “Cloud Flow” example ## Proposed behavior *Please describe your proposed change to the current behavior* * Welcome flow example * More complex example with retries ## Example *Please give an example of how the enhancement would be useful* This would be useful for users new to Prefect Cloud. These would be some good flows to deploy to their Team for testing. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Issue when MPL drawing circuits - scale issue <!-- ⚠ If you do not respect this template, your issue may be be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: 0.8.0 - **Python version**: 3.7.3 - **Operating system**: OS X - Version 10.9.5 ### What is the current behavior? By default if you have large names within the circuit, some of them will be out of the resultant diagram. ### Steps to reproduce the problem You need to put large names to the circuit elements. For example this code https://github.com/Morcu/q-means/blob/master/visualizer.py style = {'backgroundcolor': '#DFEAEC', 'showindex': False, 'displaycolor': { 'id': 'red', 'meas':'#0066DA', 'h': '#00DAA7', 'u3': '#EFFF1B'} } qc.draw(output='mpl', style=style, reverse_bits= False,filename=circuit_file) An example of the resultant circuit https://github.com/Morcu/q-means/blob/master/circuit-without-scale.png ### What is the expected behavior? We think that by default the scale parameter should be set to include large name of the circuit elements. style = {'backgroundcolor': '#DFEAEC', 'showindex': False, 'displaycolor': { 'id': 'red', 'meas':'#0066DA', 'h': '#00DAA7', 'u3': '#EFFF1B'} } qc.draw(output='mpl', style=style, reverse_bits= False,filename=circuit_file,scale=1.2) The resultant circuit should be like this https://github.com/Morcu/q-means/blob/master/circuit-with-scale.png ### Suggested solutions By default the scale should be calculated according to the circuit larger names. --- ### What is the expected behavior? --- ### What is the expected enhancement? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Explore transforming State into a class instead of a String + Data attribute Instead of the current State class that has a string `state` and Any `data` attribute, as well as a bunch of `is_finished()` methods that check the state string against a list of valid strings, consider building a hierarchy of State classes: ```python # Base class class State: # class attribute for example; set in __init__ data = None # ------------------------------------------- # Finished classes - Success, Failed, Skipped class Finished(State): pass class Success(Finished): pass class Failed(Finished): # class attribute for example; set in __init__ message = None class Skipped(Finished): pass # ------------------------------------------- # Pending classes - Retry and Scheduled (and Pending itself) class Pending(State): pass class Retry(Pending): # class attribute for example; set in __init__ retry_time = None class Scheduled(Pending): # class attribute for example; set in __init__ scheduled_time = None ``` Then checking and working with states is easier than the current system of checking the string attribute and hoping the data attribute matches an expected schema: ```python s = Success(100) f = Failed('Division by zero error') assert isinstance(s, Finished) assert isinstance(f, Finished) r = Retry(datetime(2018, 12, 31)) assert isinstance(r, Pending) assert isinstance(r.retry_time datetime) ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Add stability to speech API results. This was excluded originally to keep the responses simple. For streaming the interim_results have stability information for each response. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Multiple versions of same build_requires package in lockfile? Hello, we are facing the issue that we are generatng a lockfile and in this lockfile we have seen that the same build_requires package is listed twice (with different versions). After analysing this we have found out that one version is provided by the profile and one by the recipe itself. Is that supposed to be allowed? I would have expected this to be forbidden. Also when installing using the lockfile which version is then installed? BTW. We are using Conan 1.59. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: Switch to lumino We have continued the Phosphor project code base as a new project, [lumino](https://github.com/jupyterlab/lumino). We have released all of the `lumino` packages at the same version as they were previously in Phosphor. The plan is for 2.0 to depend on `lumino`, and resolve any `@phosphor` libraries to `lumino` using `yarn` resolutions. - [x] Migrate code to point to `@lumino` packages - [x] Add yarn resolution for `@phosphor` -> `@lumino` - [x] Update documentation Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: assemble ignores backend option <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: 'qiskit-terra': '0.18.0.dev0+8c19253', 'qiskit-aer': '0.9.0', - **Python version**:3.8 - **Operating system**: macOS ### What is the current behavior? assemble ignores backend option ### Steps to reproduce the problem ```python from qiskit import QuantumCircuit, assemble from qiskit.providers.aer import AerSimulator, FakeMontreal qc = QuantumCircuit(5) qc.measure_all() backend = FakeMontreal() backend.set_options(shots=3000) # backend = AerSimulator(shots=3000) print(assemble(qc, backend).config.shots) ``` The code outputs 1024. ### What is the expected behavior? But it should be 3000. ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Don't import dreload by default. `core/builtin_trap.py` ``` python from IPython.lib import deepreload if self.shell.deep_reload: self.auto_builtins['reload'] = deepreload.reload else: self.auto_builtins['dreload']= deepreload.reload ``` Does it make sens to stop doing that by default ? Warn message say it will be removed in 6.0. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: docker-compose --rm always returns 1 It doesn't matter how I kick it, it always returns 1 and my ansible task fails! However, without `--rm` it returns 0. docker-compose.yml ``` test: image: debian:wheezy ``` Ubuntu 14.04.2 LTS Docker version 1.6.2, build 7c8fca2 docker-compose 1.2.0 ``` root@megabox:~# docker-compose run --rm test true root@megabox:~# echo $? 1 ``` I believe the exit code comes from `compose/cli/main.py:346`, however, `--rm` doesn't seem to affect the exit code so this doesn't make much sense... ``` ¦ ¦ exit_code = container.wait() ¦ ¦ if options['--rm']: ¦ ¦ ¦ log.info("Removing %s..." % container.name) ¦ ¦ ¦ project.client.remove_container(container.id) ¦ ¦ sys.exit(exit_code) ``` How come it's always 1? It should also be noted that the containers still show up in `docker ps -a` despite using `--rm`, so I'm guessing something is wrong. I thought it might be apparmor at first so I disabled it `service apparmor teardown` but no change. Any ideas? Thanks! Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conda/conda codebase. Here's the problem: version '==' interpreted differently in 4.3 and 4.4 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Cannot compose circuits with different numbers of measurements <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: 0.17.4 - **Python version**: - **Operating system**: ### What is the current behavior? Compose fails when combining circuits with no measurements together with those that do, e.g. ```python ansatz = TwoLocal(2, rotation_blocks='ry', entanglement_blocks='cx') qc = QuantumCircuit(2) qc.measure_all() ansatz.compose(qc) ``` gives: CircuitError: "Trying to compose with another QuantumCircuit which has more 'in' edges." while `+` works, but is deprecated in favor of `compose`. ### Steps to reproduce the problem ### What is the expected behavior? ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: DataCollator problem # ❓ Questions & Help <!-- The GitHub issue tracker is primarly intended for bugs, feature requests, new models and benchmarks, and migration questions. For all other questions, we direct you to Stack Overflow (SO) where a whole community of PyTorch and Tensorflow enthusiast can help you out. Make sure to tag your question with the right deep learning framework as well as the huggingface-transformers tag: https://stackoverflow.com/questions/tagged/huggingface-transformers If your question wasn't answered after a period of time on Stack Overflow, you can always open a question on GitHub. You should then link to the SO question that you posted. --> ## Details <!-- Description of your issue --> Hi everybody I found an error in the following Colab: https://colab.research.google.com/drive/1jwXgtOXE8v8_qkiOCbjFQRFC5semK8T7?usp=sharing Specifically, As far I understand something changed with the implementation of the following snippet: class T2TDataCollator(DataCollator): def collate_batch(self, batch: List) -> Dict[str, torch.Tensor]: .......... <br> I got the following error: **TypeError: function() argument 1 must be code, not str** Can you suggest any workarounds? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the gitpython-developers/GitPython codebase. Here's the problem: Error while listing submodules GitPython has a problem while listing submodules. As '.gitmodules' contains all the modules have ever been registered, it becomes problematic when some of them are removed. 'repo.submodules' will fail to work in this situation, though, 'repo.iter_submodules()' still works. But when 'repo' itself is a submodule, 'repo.iter_submodules()' does not yield any result. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Indented command hits error We previously allowed entered code to be indented, for convenient pasting from editors, web pages, etc. This no longer works in 0.11rc1: `<space><space>a=1` gives an IndentationError. I think previously we solved this by prepending `if True:\n` if the first line was indented, although I don't know if there's a neater solution. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the apache/airflow codebase. Here's the problem: Refactor OpsgenieAlertHook to official python sdk ### Body Currently [OpsgenieAlertHook](https://github.com/apache/airflow/blob/d79f506213297dc0dc034d6df3226361b6f95d7a/airflow/providers/opsgenie/hooks/opsgenie_alert.py#L29) works with HTTP. We should change the hook to work with the [official python sdk](https://github.com/opsgenie/opsgenie-python-sdk) This will allow also to easily integrate to airflow the various methods and options the SDK has to offer https://github.com/opsgenie/opsgenie-python-sdk#documentation-for-api-endpoints ### Committer - [X] I acknowledge that I am a maintainer/committer of the Apache Airflow project. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: MSI Installer: Support upgrade I just attempted to upgrade from meson `0.42.1` to `0.43` and was presented with this screen using the MSI installer ![2017-10-11 14_37_47-windows installer](https://user-images.githubusercontent.com/3422847/31468523-efdaf1d2-ae92-11e7-8c93-04b1978479cf.png) At the very least, that error message should be a bit more clear. Besides that - a huge :+1: for having a windows installer! Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: add visualization of open controlled gates [text drawer] In PR #3739, open controlled gates were implemented. With that PR a new keyword argument was added to specify the control state, `XGate().control(3, ctrl_state=6)` This creates a 4 qubit gate where the first three qubits are controls and the fourth qubit is the target where the x-gate may be applied. A `ctrl_state` may alternatively be expressed as an integer string, `XGate().control(3, ctrl_state='110')` where it is more apparent which qubits are open and closed. In this case when q[0] is open and q[1] and q[2] are closed the x-gate will be applied to q[4]. <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected behavior? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: Multivariate Normal Hi all, I noticed that sampling from predefined distributions works a bit different in jax than it does in numpy. Is it possible to use the jax.random module to sample from a multivariate normal distribution (with dense covariance matrix)? If not, is there any other way? So far I only managed to sample from one with a unit variance, using jax.random.normal. Cheers, Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Issues with proxies I've started Conan server in my organization's local network. For external sites (like github) proxy must be used, but not for computers in local network. So, I have there env variables: ``` HTTP_PROXY=http://proxy.domain:3128 HTTP_PROXY=https://proxy.domain:3128 NO_PROXY=localhost,127.0.0.1,*.domain,192.168.* ``` With these variables I can create packages with recipes in my local cache (and this recipes can download external sources), but cannot download recipes and prebuilt packages from organization's Conan server. I've tried to set same settings in conan.conf, but had no luck. Also I've tried to use Conan server domain name and/or IP address in NO_PROXY with same result: ``` > conan search -r <remotename> "OpenCV*" ERROR: Permission denied for user: '<username>'. [Remote: <remotename>] ``` But if I disable all proxies (comment in conan.conf and unset env variables), it works just fine: ``` Existing package recipes: OpenCV/3.3.1@lukyanets/testing ``` Conan v. 1.0.1, OS: Arch Linux, CentOS 6, Windows 10. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Support the progress bar to another stream handler <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? ProgressBar is a good visualization tool when you have tons of jobs running in the background. Now, the progress bar will be printed in `sys.stdout`, I wonder that is it possible to add an argument to `TextProgressBar` to print the progress on `sys.stderr` or the other handler? Then, users can control when the progress bar is displayed. (I know that users can always write the wrapper to wrap `sys.stdout` to the logger but it seems to be a workaround.) Thanks. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Bug handling errors while downloading a file If an error happens while downloading a file (signed URL), the client is failing to print an output message because of a None output object. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: is_vision_available() fails when using pillow-simd ### System Info - `transformers` version: 4.30.2 - Platform: Linux-5.11.0-1022-aws-x86_64-with-glibc2.29 - Python version: 3.8.10 - Huggingface_hub version: 0.15.1 - Safetensors version: 0.3.1 - PyTorch version (GPU?): 2.0.0+cu118 (True) - Tensorflow version (GPU?): 2.8.0 (True) - Flax version (CPU?/GPU?/TPU?): not installed (NA) - Jax version: not installed - JaxLib version: not installed - Using GPU in script?: no - Using distributed or parallel set-up in script?: no ### Who can help? @sgugger @apbard - additional checks introduced in https://github.com/huggingface/transformers/pull/23163 are failing on my environment. This is because I'm using [pillow-simd](https://github.com/uploadcare/pillow-simd) and not the vanilla pillow package. Is this drop-in pillow replacement not supported or is it possible to introduce additional logic to support this? ### Information - [ ] The official example scripts - [ ] My own modified scripts ### Tasks - [ ] An officially supported task in the `examples` folder (such as GLUE/SQuAD, ...) - [ ] My own task or dataset (give details below) ### Reproduction First install pillow-simd (`pip install pillow-simd`) Run the following code: ``` import PIL print(PIL.__version__) import transformers print(transformers.utils.import_utils.is_vision_available()) ``` ### Expected behavior Previous versions (before 4.30.*) return `True` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: Compiling extensions without source map files ### Problem JLab 3.0 extensions are built with .map files, even in production mode, which take a huge amount of space. ### Proposed Solution We should make it possible (and possibly recommended/default) to build the new extensions without .map files. For example, for the ipywidgets jupyterlab manager, the static folder went from 2240K (with source maps) to 488K (without source maps). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Add support for creation of parallel task when no engine is running IPython-0.11 complains when I try to create a parallel task when no engines are running. This makes sense for users who need results directly after they create a task. But there are also users who would like to create tasks in advance, before any engines are started. These tasks could have been stored in ipcontroller/backend database. When the first engine connects to ipcontroller it could start processing those tasks. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Make sure datastore.entity.Entity.__repr__ agrees with internal logic of Entity class From TODO: ``` python # TODO: Make sure that this makes sense. # An entity should have a key all the time (even if it's partial). ``` See [`datastore.entity.Entity.__repr__`](https://github.com/GoogleCloudPlatform/gcloud-python/blob/1f2aaf3606802f4f02eeb30e22e1082ef7f4594e/gcloud/datastore/entity.py#L210) for relevant code and #146 for some context. `git blame` output ``` dec0e7c6 (JJ Geewax 2014-01-28 15:15:40 -0500 210) # TODO: Make sure that this makes sense. ``` Make sure datastore.entity.Entity.__repr__ agrees with internal logic of Entity class From TODO: ``` python # TODO: Make sure that this makes sense. # An entity should have a key all the time (even if it's partial). ``` See [`datastore.entity.Entity.__repr__`](https://github.com/GoogleCloudPlatform/gcloud-python/blob/1f2aaf3606802f4f02eeb30e22e1082ef7f4594e/gcloud/datastore/entity.py#L210) for relevant code and #146 for some context. `git blame` output ``` dec0e7c6 (JJ Geewax 2014-01-28 15:15:40 -0500 210) # TODO: Make sure that this makes sense. ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Create `backend.properties` method in API and Terra <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? - [x] Update methods in API `backend.parameters`, `backend.calibration` -> `backend.properties` - [x] Update these methods accordingly in Terra. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: IPython qtconsole (0.12) can't export to html with external png This error looks a bit like that in issue #1087 but the details are different. I create a qtconsole session with some embedded figures. Export to HTML with inline PNG works fine. Export to XHTML/SVG 'works' (with missing images). Export to HTML with external PNG creates a folder with the PNG files correctly but fails to write the HTML (leaving a zero size .html file) with the following error: ``` Error exporting HTML to /Users/claumann/Desktop/test/test.html 'ascii' codec can't decode byte 0xc2 in position 2287: ordinal not in range(128) ``` I have an html (with embedded PNG) that constitutes a minimal session reproducing this but I don't know how to attach it to this issue. The (non-graphical) content: ``` In [1]: figure() scatter(r_[0,1,2], r_[0,1,2], marker='x') display(gcf()) <embedded image> In [2]: !uname -a Darwin blackbear.local 11.2.0 Darwin Kernel Version 11.2.0: Tue Aug 9 20:54:00 PDT 2011; root:xnu-1699.24.8~1/RELEASE_X86_64 x86_64 In [3]: np.__version__ Out[3]: '2.0.0.dev-26aa3cf' In [4]: pylab.__version__ Out[4]: '2.0.0.dev-26aa3cf' In [5]: matplotlib.__version__ Out[5]: '1.2.x' ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the gitpython-developers/GitPython codebase. Here's the problem: Project description in Pip should pull in contents of README.md The [Project description in Pip](https://pypi.org/project/GitPython/) should pull in the [`README.md`](https://github.com/gitpython-developers/GitPython/blob/main/README.md) by moving the `long_description` in [`setup.py`](https://github.com/gitpython-developers/GitPython/blob/main/setup.py#L98) to `setup.cfg` like: Example `setup.cfg` ``` [metadata] long_description = file: README.md long_description_content_type = text/markdown ``` It probably also makes sense to remove the language from the [`README.md`](https://github.com/gitpython-developers/GitPython/blob/main/README.md) that suggests GitPython is not actively developed anymore since that does not seem to be the case. Alternatively, there could be a Pip Product Description specific markdown file to use instead of the default `README.md` but I think cleaning up and improve the existing `README.md` a bit and using that for the pip product description makes the most sense. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Purge persistent Ninja state when doing a full reconfigure. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Can't invert gate created from QuantumCircuit.to_gate <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: - **Python version**: - **Operating system**: ### What is the current behavior? When inverting a gate created from QuantumCircuit.to_gate the following exception is raised: `ValueError: not enough values to unpack (expected 3, got 2)` ### Steps to reproduce the problem ``` qc = QuantumCircuit(1) qc.x(0) gate = qc.to_gate() gate.inverse() ``` ### What is the expected behavior? ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: `docs` check is failing on CI <!-- Welcome! Thank you for contributing. These HTML comments will not render in the issue. Before creating a new issue: * Search for relevant issues * Follow the issue reporting guidelines: https://jupyterlab.readthedocs.io/en/latest/getting_started/issue.html --> ## Description The `docs` check now seems to be failing on CI. ## Reproduce Example run: https://github.com/jupyterlab/jupyterlab/runs/5184872690?check_suite_focus=true Failing with: ![image](https://user-images.githubusercontent.com/591645/153934925-6dc1a6e3-d943-44b8-9bf3-e9ddcb785b34.png) ## Expected behavior We should get it back to green. <!--Describe what you expected to happen--> ## Context Also noticed on other PRs, for example: https://github.com/jupyterlab/jupyterlab/pull/12046 `docs` check is failing on CI <!-- Welcome! Thank you for contributing. These HTML comments will not render in the issue. Before creating a new issue: * Search for relevant issues * Follow the issue reporting guidelines: https://jupyterlab.readthedocs.io/en/latest/getting_started/issue.html --> ## Description The `docs` check now seems to be failing on CI. ## Reproduce Example run: https://github.com/jupyterlab/jupyterlab/runs/5184872690?check_suite_focus=true Failing with: ![image](https://user-images.githubusercontent.com/591645/153934925-6dc1a6e3-d943-44b8-9bf3-e9ddcb785b34.png) ## Expected behavior We should get it back to green. <!--Describe what you expected to happen--> ## Context Also noticed on other PRs, for example: https://github.com/jupyterlab/jupyterlab/pull/12046 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Make --parallel the default for pull #4428 added the `--parallel` flag to the `pull` command. What needs to be done to get that to the point where it's the default? Off the top of my head: - [ ] Some experience with `--parallel` to gather feedback. - [ ] Better, more detailed output. I have some ideas here. Do we need anything else? Is there any reason that parallel pulling should *never* become the default? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Comments should be AST nodes Consider the following program: ``` from qiskit.qasm import Qasm qasm_string = """//this is a comment OPENQASM 2.0; qreg q[2]; // This is another comment """ node_circuit = Qasm(data=qasm_string).parse() print(node_circuit.qasm()) print([ type(i) for i in node_circuit.children]) ``` The output is: ``` OPENQASM 2.0; qreg q[2]; [<class 'qiskit.qasm._node._format.Format'>, <class 'qiskit.qasm._node._qreg.Qreg'>] ``` ### What is the expected enhancement? The following output: ``` //this is a comment OPENQASM 2.0; qreg q[2]; // This is another comment [<class 'qiskit.qasm._node._comment.Comment'>, <class 'qiskit.qasm._node._format.Format'>, <class 'qiskit.qasm._node._qreg.Qreg'>, <class 'qiskit.qasm._node._comment.Comment'>] ``` The current parser ignores comments. There is room for discussion if a parser should create an AST with this information (a Full Syntax Tree). I think in our context is a handy thing to have. For example, to add annotations or metainformation, which might be handy in such experimental field. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Unable to create container with label With the following container we are getting an error creating the container: ``` dynamodb: image: instructure/dynamo-local-admin labels: - "com.acuris.service.group=companyhub" ports: - "8000:8000" ``` When we run the command: ``` docker-compose run dynamodb ``` We get the error: ``` Traceback (most recent call last): File "/bin/docker-compose", line 11, in <module> sys.exit(main()) File "/usr/lib/python2.7/site-packages/compose/cli/main.py", line 68, in main command() File "/usr/lib/python2.7/site-packages/compose/cli/main.py", line 121, in perform_command handler(command, command_options) File "/usr/lib/python2.7/site-packages/compose/cli/main.py", line 768, in run run_one_off_container(container_options, self.project, service, options) File "/usr/lib/python2.7/site-packages/compose/cli/main.py", line 1178, in run_one_off_container **container_options) File "/usr/lib/python2.7/site-packages/compose/service.py", line 288, in create_container previous_container=previous_container, File "/usr/lib/python2.7/site-packages/compose/service.py", line 795, in _get_container_create_options self.config_hash if add_config_hash else None) File "/usr/lib/python2.7/site-packages/compose/service.py", line 1338, in build_container_labels labels = dict(label_options or {}) ValueError: dictionary update sequence element #0 has length 35; 2 is required ``` However, if we change the container definition to the following then it works: ``` dynamodb: image: instructure/dynamo-local-admin labels: com.acuris.service.group: companyhub ports: - "8000:8000" ``` This has only started failing since we upgraded to docker-compose version 1.17.0, build ac53b73. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: Embed "git-describe" in bundle. I'm regularly unsure of whether the bundles have been built correctly after I pull, could we embed the value of `git describe` in the bundle and `console.log` it ? Thoughts ? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: GNU Make generator https://github.com/solvingj/conan-make_generator/blob/master/conanfile.py by @solvingj is almost it. I agree it could be built-in. Can use conditional: ``` ifneq ($(USE_CONAN),) INC_PATHS += $(CONAN_INC_PATHS) LD_PATHS += $(CONAN_LIB_PATHS) LD_LIBS += $(CONAN_LIBS) CXXFLAGS += $(CONAN_CPP_FLAGS) CFLAGS += $(CONAN_CFLAGS) DEFINES += $(CONAN_DEFINES) LDFLAGS_SHARED += $(CONAN_SHAREDLINKFLAGS) LDFLAGS_EXE += $(CONAN_EXELINKFLAGS) C_SRCS += $(CONAN_C_SRCS) CXX_SRCS += $(CONAN_CXX_SRCS) endif ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: qasm3 exporter fails if circuits have delays ### Environment - **Qiskit Terra version**: 20.0 - **Python version**: 3.8.5 - **Operating system**: linux ### What is happening? Using the qasm3 exporter, if your circuit has a delay instruction in it, the export fails complaining about opaque gates: ``` ~/venv/qiskit/lib/python3.8/site-packages/qiskit/qasm3/exporter.py in build_opaque_definition(self, instruction) 568 """Builds an Opaque gate definition as a CalibrationDefinition""" 569 # We can't do anything sensible with this yet, so it's better to loudly say that. --> 570 raise QASM3ExporterError( 571 "Exporting opaque instructions with pulse-level calibrations is not yet supported by" 572 " the OpenQASM 3 exporter. Received this instruction, which appears opaque:" QASM3ExporterError: 'Exporting opaque instructions with pulse-level calibrations is not yet supported by the OpenQASM 3 exporter. Received this instruction, which appears opaque:\nDelay(duration=50[unit=dt])' ``` ### How can we reproduce the issue? The following code demonstrates the error ``` from qiskit.qasm3 import Exporter from qiskit import QuantumCircuit circuit = QuantumCircuit(2) circuit.delay(50) circuit.h(1) circuit.measure_all() circuit.draw() Exporter().dumps(circuit) ``` ### What should happen? A proper qasm3 string should be generated. ### Any suggestions? _No response_ Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Cross-compiling warning even when consuming package Conan 1.12.3 I'm trying to package a compiler (gcc) as a tool to be used as a build requirement. Since it's a compiler for native code it must have both `os_build` (where it runs on, in my case it can be Linux, Windows or MacOS) and `os` (which is a target os for compilation output, only Linux in my case). Something like ```python class GccConan(ConanFile): name = "gcc_installer" settings = "os", "arch", "os_build" ``` When I build it I get warning: ``` gcc_installer/6.3.1@external/master: ************************************************************ gcc_installer/6.3.1@external/master: This package defines both 'os' and 'os_build' gcc_installer/6.3.1@external/master: Please use 'os' for libraries and 'os_build' gcc_installer/6.3.1@external/master: only for build-requires used for cross-building gcc_installer/6.3.1@external/master: ************************************************************ ``` Which may be fine for general case and I can even put into README a note to ignore it. However same warning appears even when I try to consume it, basically for every package I build and this is not fine (from usability perspective). I would suggest moving this warning from initialization of `ConanFile` class to somewhere where we actually build package. Or maybe make it a part of linter / hook. To help us debug your issue please explain: - [x] I've read the [CONTRIBUTING guide](https://github.com/conan-io/conan/blob/develop/.github/CONTRIBUTING.md). - [x] I've specified the Conan version, operating system version and any tool that can be relevant. - [x] I've explained the steps to reproduce the error or the motivation/use case of the question/suggestion. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: Inconsistent PreTrainedTokenizerBase.pad argument default value & docstring The docstring states the argument `padding` has a default of `False` but its default is `True` docstring: https://github.com/huggingface/transformers/blob/d5b3e56de5376aa85ef46e7f0325139d9e299a41/src/transformers/tokenization_utils_base.py#L2469-L2470 arg: https://github.com/huggingface/transformers/blob/d5b3e56de5376aa85ef46e7f0325139d9e299a41/src/transformers/tokenization_utils_base.py#L2431-L2472 This causes issues when using `DataCollatorForLanguageModeling` with an already padded dataset as it resets the attention mask. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Multiple calls to Pub/Sub Policy.open() can "interact" [E.g.][1] if you call `Policy.open()` a second time then it will overwrite the callback attached to the `Policy`. ISTM that we should "tombstone" a `Policy` so that it can't be `open()`-ed more than once. [1]: https://github.com/GoogleCloudPlatform/google-cloud-python/blob/cc7da65b4a31d7a33055afe0bd6dc9855c3d6493/pubsub/google/cloud/pubsub_v1/subscriber/policy/thread.py#L150 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Meson 0.43 module java.py class JavaCompiler is missing needed methods The JavaCompiler class appears to have fallen behind the times, so that some needed methods are missing. I have not done any kind of through review of what it would take to get JavaCompiler up to date. By simply working the failure symptoms, I found that for my project, adding the following methods, along with the changes from Issue #2569 and Issue #2570, was sufficient to build a simple Java 9 project with Meson 0.43 and Ninja: > def get_warn_args(self, level): > return ['-Xlint:all'] > > def get_no_warn_args(self): > return ['-Xlint:none'] > > def depfile_for_object(self, objfile): > return objfile + '.' + self.get_depfile_suffix() > > def get_depfile_suffix(self): > return 'd' Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Progressbars not spawned unless execute or compile are called first <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Informations - **Qiskit Terra version**: master - **Python version**: 3.7 - **Operating system**: OSX ### What is the current behavior? The following no longer spawns a progress bar" ``` HTMLProgressBar() ans = parallel_map(func, list(range(100))) ``` unless `compile` or `execute` have been run first. ### Steps to reproduce the problem uncomment the line below: ``` import time from qiskit import * from qiskit.transpiler._parallel import parallel_map from qiskit.tools.jupyter import * q = QuantumRegister(2) c = ClassicalRegister(2) qc = QuantumCircuit(q, c) qc.h(q[0]) qc.cx(q[0], q[1]) qc.measure(q, c) backend = Aer.get_backend('qasm_simulator') #qobj = compile([qc], backend) def func(t): time.sleep(0.1) return 0 TextProgressBar() parallel_map(func, list(range(100))) ``` ### What is the expected behavior? You should not have to call `execute` or `compile` before a progressbar can be displayed. ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Page jumping when output from widget interaction replaced Testing Fernando's [demo notebook](http://t.co/Ef1Ar6jmxN), I see odd jumping when I drag the slider: <iframe width="420" height="315" src="//www.youtube.com/embed/qiFbzvCclBs?rel=0" frameborder="0" allowfullscreen></iframe> www.youtube.com/watch?v=qiFbzvCclBs Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Python 3.7 installation fails due to PyYAML 3.12 - [x] Conan version: 1.6 - [x] Python version: 3.7 - Issue: Installation of Conan fails when using Python 3.7 fails due to a [bug with PyYAML](https://github.com/yaml/pyyaml/issues/126) - Reproduce: - [x] Install Python 3.7 including pip3 - [x] pip3 install conan - [x] Error out `Command "/usr/local/opt/python/bin/python3.7 -u -c "import setuptools, tokenize;__file__='/private/tmp/pip-install-7qbn6h01/PyYAML/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /private/tmp/pip-record-obq_96in/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /private/tmp/pip-install-7qbn6h01/PyYAML/` - Solution - [ ] Change dependency version to 3.13. Submodules updated before revision checkout Conan version: 1.6.1 Platform/Settings: All Description: When specifying submodules to be updated after cloning from git with the `scm` attribute, the submodules are pulled from the state of the repo's current HEAD rather than the referenced revision. - [x] I've read the [CONTRIBUTING guide](https://raw.githubusercontent.com/conan-io/conan/develop/.github/CONTRIBUTING.md). - [x] I've specified the Conan version, operating system version and any tool that can be relevant. - [x] I've explained the steps to reproduce the error or the motivation/use case of the question/suggestion. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Individual acquires are created in Qobj to Instruction converter when joined acquires should be <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: - **Python version**: - **Operating system**: ### What is the current behaviour? When a marshmallow acquire `PulseQobjInstruction` is converted to a pulse schedule `AcquireInstruction`, an individual `AcquireInstruction` is being created for each qubit, memory_slot pair. See: https://github.com/Qiskit/qiskit-terra/blob/b155373a30c5c1d6550ffb7df9c6a4d660e6dd62/qiskit/qobj/converters/pulse_instruction.py#L428 ### Steps to reproduce the problem Attempt to convert this acquire command ```python PulseQobjInstruction(duration=1200, memory_slot=[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19], name='acquire', qubits=[0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19], t0=0) ``` ### What is the expected behavior? A single `AcquireInstruction` should be created for all of the qubits involved with the acquire. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Resurrect Prefect Client The old `client.py` file which was removed needs to be reimplemented to handle communication with an execution cluster Needs to talk to server with get/post/gql Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Remove dynamic flow / task fields - [x] remove description, version and project - [x] ~flow.name -> flow.slug~ - [x] promoting an id on the tasks (?) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the dagster-io/dagster codebase. Here's the problem: Failed runs do not expose the exit code in Kubernetes ## Summary When a dagster run running as a Kubernetes job fails, the exit code is still 0. This results in not being able to track metrics/configure alerts based on the deployed Kubernetes monitoring infrastructure, e.g. prometheus. Exposing the status as failed will help track statuses, filter logs and other metadata, etc. ## Reproduction Create a run which errors out. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: [question][suggestion] Listing profile should be recursive Hello, I use multiple profiles, and those are organized in subdirectories: + `~/.conan/profiles/application/x64_gcc6_app1` + `~/.conan/profiles/application/x64_msvc_app1` + `~/.conan/profiles/compilers/x64_gcc6` + `~/.conan/profiles/compilers/x64_msvc` The "applications" profile include other profiles etc. This works pretty well, so I assume using subdirectory in profiles is supported and is not a problem. However, the `conan profile list` command does not list profiles contained in subdirectories. I believe it should recursively search for profile files rather than only list the files available directly in the `~/.conan/profiles` directory. I'm wondering if there is a particular reason why the search is limited to the `~/.conan/profiles` directory and if you'd be open to changing this behavior. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the apache/airflow codebase. Here's the problem: Add unittests for GCSTaskHandler **Description** The `GCSTaskHandler` from `airflow.utils.log.gcs_task_handler` does not have a unit test. **Use case / motivation** The test is necessary so that we can be able to move the `GCSTaskHandler` to its providers package(`google`) **Related Issues** #9386 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: Download models from a private hub In the context of a private hub deployment, customers would like to use from_pretrained() to load models from their hub, not from the public hub. This doesn't seem to be configurable at the moment and it would be nice to add this feature. The obvious workaround is to clone the repo first and then load it from local storage, but this adds an extra step. It'd be great to have the same experience regardless of where the hub is hosted. The same issue exists with the datasets library and the CLI. I'm going to create issues there as well, and I'll reference them below. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Update ShimWarnings to include version numbers. Updating ShimWarnings to include since when the modules have been moved would be helpful to indicate people to transition, or at least to inform better when they can stop using old import versions. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Pub/Sub: wrong inherited documentation for StreamingPullFuture The [documentation](https://googleapis.github.io/google-cloud-python/latest/pubsub/subscriber/api/futures.html) for `StreamingPullFuture`'s methods like [`result()`](https://googleapis.github.io/google-cloud-python/latest/pubsub/subscriber/api/futures.html#google.cloud.pubsub_v1.subscriber.futures.StreamingPullFuture.result) and [`exception()`](https://googleapis.github.io/google-cloud-python/latest/pubsub/subscriber/api/futures.html#google.cloud.pubsub_v1.subscriber.futures.StreamingPullFuture.exception) doesn't make sense because it describes Publish futures not streaming pull futures. [`StreamingPullFuture`](https://github.com/googleapis/google-cloud-python/blob/a42b0f1abe83ce981c9573f4c56acc72e4344a2f/pubsub/google/cloud/pubsub_v1/subscriber/futures.py#L20) inherits [`futures.Future`](https://github.com/googleapis/google-cloud-python/blob/a42b0f1abe83ce981c9573f4c56acc72e4344a2f/pubsub/google/cloud/pubsub_v1/futures.py#L24), that's where the "wrong" documentation got carried over. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: scan+pmap shape bug @JasperSnoek reported this one: ```python import jax.numpy as np from jax import lax, random from jax import pmap from jax.lib import xla_bridge nrep = xla_bridge.device_count() key = random.PRNGKey(0) n = 80 a_in = np.linspace(0, 1, n)[:, None] a = np.dot(a_in, a_in.T) + np.eye(n) * 0.1 b = random.normal(key, (n,)).flatten() def pmvm(a, b): a = a.reshape((nrep, -1, a.shape[1])) func = pmap(lambda z: np.dot(z, b)) return func(a).reshape(b.shape) for i in range(10): b = pmvm(a, b) # Ok iters = np.arange(10) def body(carry, i): return pmvm(a, carry), i res = lax.scan(body, b, iters) ``` It results in some kind of shape error (the exact one depends on how many replicas there are). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: no string.replace method Currently the only way to perform an operation similar to pythons `str.replace(old, new)` is with `new.join(str.split(old))` which feels clunky. A `str.replace(old, new)` method would be a welcome addition. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the apache/airflow codebase. Here's the problem: Add an AWS operator for Create RDS Database ### Description @eladkal suggested we add the operator and then incorporate it into https://github.com/apache/airflow/pull/23681. I have a little bit of a backlog right now trying to get the System Tests up and running for AWS, but if someone wants to get to it before me, it should be a pretty easy first contribution. The required API call is documented [here](https://boto3.amazonaws.com/v1/documentation/api/latest/reference/services/rds.html#RDS.Client.create_db_instance) and I'm happy to help with any questions and./or help review it if someone wants to take a stab at it before I get the time. ### Use case/motivation _No response_ ### Related issues Could be used to simplify https://github.com/apache/airflow/pull/23681 ### Are you willing to submit a PR? - [ ] Yes I am willing to submit a PR! ### Code of Conduct - [X] I agree to follow this project's [Code of Conduct](https://github.com/apache/airflow/blob/main/CODE_OF_CONDUCT.md) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Pub/Sub doc: missing definition for `max_lease_duration` in FlowControl The ref doc for [`max_lease_duration`](https://googleapis.github.io/google-cloud-python/latest/pubsub/types.html#google.cloud.pubsub_v1.types.FlowControl.max_lease_duration) does not describe what it is or how it is used, especially about how it interacts with ack deadlines. Given that this is an important config setting for long-running tasks, we may want to provide more documentation here by showing its default value (is it 2 hours), and explaining whether max lease duration restrains ack deadline modification or ack deadline modification overwrites max lease duration when one configures both flow control settings and ack deadlines. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Dag equality <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? A method to check if two dags are the same. #1363 and #1349 are holding this up Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Lightning-AI/lightning codebase. Here's the problem: Add support for hierarchical dict ## 🚀 Feature ### Motivation Since v0.7.0, LightningModule accepts dict hparams, however, still TensorBoardLogger raises an error with hierarchical dict. Considering the compatibility of the other package, especially Hydra #807, hierarchical dict should be accepted by any loggers. ### Pitch - Flatten hierarchical dict before hparam logging ### Alternatives The function `_convert_params` in [loggers/base.py](https://github.com/PyTorchLightning/pytorch-lightning/blob/master/pytorch_lightning/loggers/base.py#L45) will be changed like: ```python def _convert_params(self, params: Union[Dict[str, Any], Namespace]) -> Dict[str, Any]: # in case converting from namespace if isinstance(params, Namespace): params = vars(params) # added part params = flatten_dict(params) # convert {'a': {'b': 'c'}} -> {'a/b': 'c'} if params is None: params = {} return params ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Release 'api_core-1.6.0a2'? or 'api_core-1.5.1'? I'd like to use the changes from https://github.com/googleapis/google-cloud-python/pull/6310 in the library I'm working on. Not sure about the version number for that one, since: - I don't know what else has been released since 1.6.0a1 - I don't know what is intended by 1.6.0a1 in https://github.com/googleapis/google-cloud-python/pull/6267 (is it a pre-release?) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Detect should show a warning about libcxx compatibility To help us debug your issue please explain: - [x] I've read the [CONTRIBUTING guide](https://raw.githubusercontent.com/conan-io/conan/develop/.github/CONTRIBUTING.md). - [x] I've specified the Conan version, operating system version and any tool that can be relevant. - [x] I've explained the steps to reproduce the error or the motivation/use case of the question/suggestion. Read: https://github.com/bincrafters/conan-boost_generator/pull/1#issuecomment-362856847 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: build_requirements is ignored I have A package, which build_requires B package. And C package requires A, build_requires B. When I execute "conan install" for C, conan will skip B. If I remove requires A, conan will not skip B. What I want is conan will install A and B. Any help you can provide would be great. Thanks To help us debug your issue please explain: To help us debug your issue please explain: - [x] I've read the [CONTRIBUTING guide](https://github.com/conan-io/conan/blob/develop/.github/CONTRIBUTING.md). - [x] I've specified the Conan version, operating system version and any tool that can be relevant. - [x] I've explained the steps to reproduce the error or the motivation/use case of the question/suggestion. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Aqua GUI interface crashes for default OSX matplotlib backend. @nonhermitian noted in #903: ### What is the current behavior? Aqua GUI interface crashes for default OSX matplotlib backend. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Firestore: 'Query.order_by("__name__")' implies converting field values to extended paths. Per the `query-cursor-vals-docid` conformance test. ```python query = collection.order_by('__name__').start_at(['a']).end_at(['z']) ``` The `'a'` should be converted to `/projects/<project-id>/databases/<database>/<collection_path>/a`; likewise the `z`. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Saving the output of `flow.visualize` Prefect currently generates a random filename in order to save the state of the flow. It's more useful to store the visualization to a know location so that we can consume the file downstream (either upload it to S3 or push it to a monitoring service, etc.) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: [logs] Piped commands are not colored anymore I made a terminal dashboard which is using `docker-compose logs` command to display logs of some services. With the `colorama.init()` (`compose/compose/cli/colors.py`) introduced in version 1.10 for Windows terminal coloration, piped commands seem not being able to display colors. **NodeJS example** ```javascript 'use strict'; let spawn = require('child_process').spawn; const CWD="YOUR_COMPOSE_PROJECT_DIR"; function appendToBox(data) { if (data instanceof Buffer) { data = data.toString(); } data = data.replace(/\n$/, ''); // Avoid double new line console.log(data); } let tail = spawn( 'docker-compose', ['logs', '--tail=1'], {cwd: CWD} ); tail.stdout.on('data', appendToBox); tail.stderr.on('data', appendToBox); tail.on('exit', (code) => { appendToBox('child process exited with code ' + code); }); ``` **Command line example** ``` docker-compose logs --tail=1 | tee ``` **Manual workaround** Comment the line `colorama.init()` in file `/usr/lib/python3.6/site-packages/compose/cli/colors.py`. Tested on Archlinux, I suppose your install dir may eventually vary depending on your distribution. **Issue resolution** If colorama is for Windows only could it be possible to run the `colorama.init()` only with that OS context ? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the dagster-io/dagster codebase. Here's the problem: Materialise an asset with a run config and partition key ### What's the use case? Minimum example: ``` @asset(config_schema={"value": str}) def configured(context): return context.op_config["value"] @asset(partitions_def=StaticPartitionsDefinition(["1", "2"])) def partitioned(context, configured): return context.partition_key + configured materialize_to_memory([partitioned, configured], partition_key="1", run_config={"ops":{"configred":{"config":{"value":"a"}}}}) ``` This raises "dagster._check.CheckError: Invariant failed. Description: Cannot provide both run_config and partition_key arguments to `execute_in_process`" ### Ideas of implementation _No response_ ### Additional information _No response_ ### Message from the maintainers Impacted by this issue? Give it a 👍! We factor engagement into prioritization. Can you help me debug this systematically and explain your reasoning?