[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the celery/celery codebase. Here's the problem: chord does nothing when the header is an empty list ## Checklist - [ x ] I have included the output of ``celery -A proj report`` in the issue. (if you are not able to do this, then at least specify the Celery version affected). Affected version: 4.1.0 - [ x ] I have verified that the issue exists against the `master` branch of Celery. ## Steps to reproduce Initiate the Celery configuration, and run the following code. ```py @celery.task() def add(a, b): return sum(a) + b print(chord([], add.s(3)).apply_async().get()) ``` ## Expected behavior Does not wait, executes the callback task, prints 3. ## Actual behavior Does nothing, the `get` call is stuck forever. I do not know if it's a bug, or a non-feature, but it should be at least documented. The use case behind this is we generate a list dynamically using Python's list comprehension `[my_task.s(i) for i in range(n)]`, the list is potentially empty. Another thing is the fact that the response sent to the callback is a list only if there is more than one element in the list is also counter intuitive and should be at best overridable. http://docs.celeryproject.org/en/latest/userguide/canvas.html#chords Thanks a lot in advance Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: RPATH removal breaks Xorg modules Trying to build xorg (from github.com/anholt/xserver, branch Meson; I used `meson --prefix=~/prefix/xorg -Dxorg=yes -Dxephyr=true -Dxwayland=yes -Dglamor=yes -Dxnest=no -Ddmx=false -Dxkb_dir=/usr/share/X11/xkb -Dxkb_output_dir=/var/lib/xkb/compiled -Dhal=no -Dsystemd_logind=yes build` to build) works just fine. But the installation fails, specifically in how the RPATH removal mangles the modules. With the default set of modules, dlopen() of modesetting_drv.so attempts to resolve a zero-length symbol: ``` [ 8270.883] (II) LoadModule: "modesetting" [ 8270.883] (II) Loading /home/daniels/prefix/xorg/lib64/xorg/modules/drivers/modesetting_drv.so [ 8270.884] (EE) Failed to load /home/daniels/prefix/xorg/lib64/xorg/modules/drivers/modesetting_drv.so: /home/daniels/prefix/xorg/lib64/xorg/modules/drivers/modesetting_drv.so: undefined symbol: [ 8270.884] (EE) Failed to load module "modesetting" (loader failed, 0) ``` Here is the file installed by `meson install`: https://static.fooishbar.org/tmp/modesetting_drv.so.broken And here is the original: https://static.fooishbar.org/tmp/modesetting_drv.so.working And, for completeness, the `chrpath -d` module, which also works fine: https://static.fooishbar.org/tmp/modesetting_drv.so.working.chrpath @aaronp24 and ajax worked out that the difference was Meson NULLing out the rpath, whereas `chrpath` deletes it entirely. NULLing it out breaks entirely, because modesetting has a symbol named `modesetting`. Its rpath is also `.../hw/xorg/driver/modesetting`. Thanks to the magic of read-only data sharing, the symbol definition points to the end of the rpath string, which we've just obliterated. Oops. Anyway, it looks like switching from `chrpath -r ''` to `chrpath -d` type semantics should fix it. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: @jupyterlab/hub-extension in jupyterlab==3.0.0-rc.6 not appearing in the menus/commands Testing with `jupyterlab==3.0.0-rc.6` (we can't use 3.0.0-rc.11 atm because react 0.17 is incompatible with libraries used by some of our extensions), we're not finding the `Hub Control Panel` and cousins (any of the commands added in: https://github.com/jupyterlab/jupyterlab/blob/master/packages/hub-extension/src/index.ts) in the menus or the commands. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: support for scipy.stats.dirichlet Registering interest in having support for this distribution (specifically logpdf() and rvs()). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: debugger.py: pydb broken pydb support in IPython/core/debugger.py needs updating for the new configuration: line 41: ``` #We have to check this directly from sys.argv, config struct not yet available if '-pydb' in sys.argv: ``` but -pydb and --pydb are not accepted as a commandline argument for ipython Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: Support for non-scalar np.repeat arguments. Hello, I noticed that jax.numpy.repeat does not support non-scalar repeats. ``` np.repeat(np.array([[1, 2, 3]]), np.array([2, 3, 1])) NotImplementedError Traceback (most recent call last) <ipython-input-120-c0c19bd58e3a> in <module>() ----> 1 np.repeat(np.array([[1, 2, 3]]), np.array([2, 3, 1])) google3/third_party/py/jax/numpy/lax_numpy.py in repeat(a, repeats, axis) 1539 if not isscalar(repeats): 1540 raise NotImplementedError( -> 1541 "np.repeat implementation only supports scalar repeats") 1542 if axis is None or isscalar(a): 1543 a = ravel(a) ``` The expected results with numpy: ``` array([1, 1, 2, 2, 2, 3]) ``` Note that the documentation indicates that this is supported: https://jax.readthedocs.io/en/latest/_autosummary/jax.numpy.repeat.html Is it possible to add support for this in jax, and/or is there a workaround? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Undefined references to UBSan when linking CUDA project with `b_sanitize=undefined` **Describe the bug** Hi, as a follow-up to https://github.com/mesonbuild/meson/issues/8337, I've noticed that when I enable UBSan for my project (`-Db_sanitize=undefined`), nvcc is fails to link the executables, producing lots of error about undefined references from libubsan. My current workaround is to add the followin snippet to meson.build: ``` if get_option('b_sanitize') == 'undefined' add_project_link_arguments('-lubsan', language: 'cuda') endif ``` This isn't sth that is a blocker for me or very problematic because the workaround is very simple, just giving you a heads up; @obilaniu would you care to take a look? **To Reproduce** Use the same project that was included with https://github.com/mesonbuild/meson/issues/8337, just add `-Db_sanitize=undefined` to `meson setup` invocation. **Expected behavior** Project linking without errors. **system parameters** * Native build * Ubuntu 18.04, gcc (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0, Ubuntu packages: cuda-10-0, libboost-all-dev * Python 3.6.9 * meson 0.56.1 * ninja 1.8.2 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Operator() cannot simualte circuits with barrier it should, as they are just compiler directives. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: from_dict() should be able to handle complex numbers <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: - **Python version**: - **Operating system**: ### What is the current behavior? .from_dict() will error out if (actual) complex numbers are present where complex numbers should be present. It's requiring that complex numbers be specified as lists when it should instead allow them to be specified as lists but also allow them to be complex numbers ### Steps to reproduce the problem See [these](https://github.com/Qiskit/qiskit-aer/pull/504) currently failing unit tests ``` qiskit.validation.exceptions.ModelValidationError: "{'results': {0: {'data': {'unitary': {0: {0: ['(1+0j) cannot be parsed as a complex number.'] ... ``` ### What is the expected behavior? There's no reason for it to fail - when serializing things we should change complex to lists but '_deserialization' (from_dict) should be able to handle complex numbers (as well as the list format). ### Suggested solutions Don't throw an error if the thing we're trying to deserialize is already a complex number [here](https://github.com/Qiskit/qiskit-terra/blob/792e1b7f866b9f3685566341fa6b4b54d5ba33e9/qiskit/validation/fields/custom.py#L50) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: remove ghpages_documentation_deploy.sh <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? since all the documentation is now in qiskit/qiskit we should remove this script. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the apache/airflow codebase. Here's the problem: Resolve warning about renderedtifields query ### Body This warning is emitted when running a task instance, at least on mysql: ``` [2022-09-21, 05:22:56 UTC] {logging_mixin.py:117} WARNING - /home/airflow/.local/lib/python3.8/site-packages/airflow/models/renderedtifields.py:258 SAWarning: Coercing Subquery object into a select() for use in IN(); please pass a select() construct explicitly ``` Need to resolve. ### Committer - [X] I acknowledge that I am a maintainer/committer of the Apache Airflow project. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: vmap fails possibly due to internal mishandling of scalar ```python import jax import jax.numpy as np x = np.zeros([3,2], dtype=np.float32) y = np.zeros([3], dtype=np.float32) foo = jax.vmap(np.vdot, (1,None), 0) foo(x,y) ``` Gives `TypeError: transpose permutation isn't a permutation of operand dimensions, got permutation (1, 0) for operand shape (2L,).` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: QTConsole tooltip placement y-padding missing ![shot](https://cloud.githubusercontent.com/assets/7333933/4716268/a2e51450-5906-11e4-832a-ed3252579b6c.png) with git master 5ef1976 Upper half is before and bottom is after fix. PR in a moment. Continuing QTC regression issues from https://github.com/ipython/ipython/issues/6726 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Vision raises TypeError: b'...' is not JSON serializable on Python 3 Simple reproducible case: ``` python import io import os from google.cloud import vision vision_client = vision.Client() file_name = os.path.join( os.path.dirname(__file__), 'resources/wakeupcat.jpg') with io.open(file_name, 'rb') as image_file: image = vision_client.image( content=image_file.read()) labels = image.detect_labels() print('Labels:') for label in labels: print(label.description) ``` works fine on Python 2, fails on Python 3. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: setp() issue in ipython notebook with figure references In IPython notebook, when I run `setp()` to change parameters of a figure created in another cell and accessed with its reference, an exception occurs ``` python --------------------------------------------------------------------------- AttributeError Traceback (most recent call last) <ipython-input-82-54a641ac28e1> in <module>() ----> 1 setp(axis.lines[0], linewidth=2) /home/amir/virtualenv/cr/local/lib/python2.7/site-packages/matplotlib/pyplot.pyc in setp(*args, **kwargs) 238 def setp(*args, **kwargs): 239 ret = _setp(*args, **kwargs) --> 240 draw_if_interactive() 241 return ret 242 /home/amir/virtualenv/cr/local/lib/python2.7/site-packages/IPython/zmq/pylab/backend_inline.py in draw_if_interactive() 123 # flush_figures() will act upon these values 124 --> 125 fig = Gcf.get_active().canvas.figure 126 127 # Hack: matplotlib FigureManager objects in interacive backends (at least AttributeError: 'NoneType' object has no attribute 'canvas' ``` Nevertheless, `setp()` successfully does its job but since IPython notebook by default closes the figures of previous cells the exception occurs. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: storage.bucket.Bucket.copy_blob missing option to preserve ACL [Unlike](https://cloud.google.com/storage/docs/gsutil/commands/cp) `gsutil`. > Note that by default, the gsutil cp command does not copy the object ACL to the new object, and instead will use the default bucket ACL. You can override this behavior with the -p option. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: QuantumCircuit compose is throwing away calibrations <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: master on commit 5be00b6626eb6ef902603b91e429bebd8563f3ae - **Python version**: 3.7.3 - **Operating system**: Ubuntu ### What is the current behavior? In quantum circuit compose we have `dest._calibrations.update(other.calibrations)`. A calibration looks like this: ``` defaultdict(dict, {'x': {((0,), (0.1, 30.0, 0.2)): Schedule((0, Play(Drag(duration=160, amp=(0.1+0j), sigma=30.0, beta=0.2), DriveChannel(0))), name="x")}}) ``` Therefore, if we have multiple calibration for `x` each one for a different qubit `compose` will loose them. ### Steps to reproduce the problem A simple example suffices to see why this is the case ``` aa = {'a': {(0,): 'aa'}} bb = {'a': {(1,): 'bb'}} aa.update(bb) ``` results in `{'a': {(1,): 'bb'}}` i.e. the calibration for `(0, )` is no longer present. ### What is the expected behavior? In the simple example above we should have `{'a': {(0,): 'aa', (1,): 'bb'}}`. I.e. the expected behavior is that all calibration be carried over when using `compose`. ### Suggested solutions Replace `dest._calibrations.update(other.calibrations)` with something tailored to the structure of the calibrations dict. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the dagster-io/dagster codebase. Here's the problem: Windows build broken https://dev.azure.com/elementl/dagster/_build/results?buildId=7627&view=logs&j=3108c3d6-f430-545a-6d06-0bbb96d639c3&t=652bead6-5c91-5891-e3ee-4a66fd4b0486 Blames to https://dagster.phacility.com/D3069 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: RTD build is broken Can look at this, leaving as note as reminder. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Typing % doesn't restrict autocompletion to just magics ## Steps to reproduce * Write `%` in the prompt * Hit "Tab" ## Expected result The autocompletion list presents the user with a choice of magics. ## Actual result Every name in the local namespace is present in the list, including locals, builtins, IPython-custom variables (`_`, for example) and all magics, but at the very end. ## System info Manjaro Linux, Python 3.9.4, IPython 7.22.0 (reproduces on IPython 8.0.0.dev) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Disabling/enabling remotes A feature request from user could be summarized as: - They have multiple remotes, 20+, that are defined and installed via ``conan config install`` - Developers need to login only to a few of them 1, 2... - The remotes that the user is not logged in should be skipped. After discussing it, the most common use case is that users would like to use those remotes, even if not logged-in, because anonymous read usage is common practice. So it doesn't seem a pattern that would be useful for other users. Furthermore, it would be coupling the auth process with the remote enabling process, seems not the best way. I think that the feature that could make sense and totally address this use case too is the one of enabling/disabling remotes: - Remotes can be ``conan remote disable <remote-name>`` or ``conan remote enable <remote-name>`` - Disabled remotes are NOT removed from the definition, that means that packages that were installed from that remote do not lose their tracking to that remote (removing a remote cleans from the metadata the original remote) - Disabled remotes are skipped when a package install is iterating remotes - An exception is raised if a package tries to reach that remote (like --update, or completing missing sources) This is a feature I have missed myself a few times, like disabling conan-center or bincrafters for doing experiments, and later needing to look up the remote to be able to set-up it again, and also playing with --insert to get the same order it was before. Plus it seems not very complex to implement. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: rpath contains paths to static libs Create a project with ninja backend and mirror layout: ```meson # subdir_1 my_st_lib = static_library('my_st_lib', ...) # subdir_2 my_sh_lib = shared_library('my_sh_lib', link_with: my_st_lib, ...) ``` `my_sh_lib`'s rpath will contain path to `subdir_1` (e.g. `$ORIGIN/../subdir_1`), which AFAIK is pointless. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Lightning-AI/lightning codebase. Here's the problem: Wandb Flatten Dict Wandb logger should flatten the dictionary of parameters before logging. Every other logger has the bellow pattern of code: ``` params = self._convert_params(params) params = self._flatten_dict(params) ``` ## 🐛 Bug Wandb logger does not flatten parameters resulting in dictionaries being logged to Wandb, which are not searchable causing for some loss of features in wandb. ### To Reproduce Run the cpu_template with wandb logger, and log a nested dictionary. ### Expected behavior Solution, just call ` params = self._flatten_dict(params)` this in the wandb logger. ### Environment * CUDA: - GPU: - available: False - version: None * Packages: - numpy: 1.18.5 - pyTorch_debug: False - pyTorch_version: 1.5.0 - pytorch-lightning: 0.8.4 - tensorboard: 2.2.2 - tqdm: 4.46.1 * System: - OS: Darwin - architecture: - 64bit - - processor: i386 - python: 3.7.7 - version: Darwin Kernel Version 19.4.0: Wed Mar 4 22:28:40 PST 2020; root:xnu-6153.101.6~15/RELEASE_X86_64 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Can the IPython directive use warnings for errors? Pandas would like to have a workflow where 1. the documentation build always completes to the end, even if there are warnings 2. the CI fails if there are any warnings. For regular sphinx things, this works with a combination of `-W error --keep-going`, which fails the job at the end of the build if there were any warnings. This doesn't work with exceptions in IPython blocks. Here's a small example ``` Welcome to test's documentation! ================================ .. ipython:: python 2 + 'a' The rest of the biuld .. ipython:: python 2 + 2 ``` And the relevant IPytyhon conf setting is `ipython_warning_is_error = False`. When I run ``` sphinx-build -W --keep-going "." _build/ ``` The entire document is built, but the exit code is `0`, when I'd like it to be `1`. I *hope* this is just because exceptions in IPython blocks are printed to stdout. On some basic testing, it looks like using `sphinx.util.logging` and `logger.warning` rather than `sys.stdout.write` will satisfy my needs. Are the IPython devs open to changing from `sys.stdout.write` to `logger.warning` for this? cc @tacaswell, and idea if this change would break matplotlib at all? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: [feature] Lift version limitation for the PyJWT Currently Conan has version limitation for PyJWT like this: PyJWT>=1.4.0, <2.0.0 Popular frameworks, like PyGithub, are gradually lifting minimal PyJWT version to the 2.0+, and it becomes problematic to use conan together with the rest of the scripting. Situation is temporary resolvable using virtuenv, but python version switching is yet another dimension for human mistakes, especially for non-experts in python. It would be way easier if conan can be installed together with mainstream packages in a typical environment. Can PyJWT version limit be lifted to the 2.0+? - [x] I've read the [CONTRIBUTING guide](https://github.com/conan-io/conan/blob/develop/.github/CONTRIBUTING.md). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conda/conda codebase. Here's the problem: `conda package -w` is case dependent on Windows It should be case-insensitive, because windows filesystem is case insensitive. E.g., when I run from the environment root: `conda package -w Lib\site-packages\win32\win32file.pyd` Ir finds the package, but if I run `conda package -w lib\site-packages\win32\win32file.pyd` it will report nothing. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Why do I need to do 2 imports for datastore transactions? What I see in the docs: ``` python >>> from gcloud import datastore >>> from gcloud.datastore.transaction import Transaction >>> datastore.set_defaults() >>> with Transaction(): ... datastore.put([entity1, entity2]) ``` What I want to do: ``` python >>> from gcloud import datastore >>> with datastore.Transaction() as t: ... t.put([entity1, entity2]) ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Stacktrace / traceback on `sudo docker-compose images` sudo docker-compose images Traceback (most recent call last): File "/usr/bin/docker-compose", line 11, in <module> load_entry_point('docker-compose==1.17.1', 'console_scripts', 'docker-compose')() File "/usr/lib/python3.6/site-packages/compose/cli/main.py", line 68, in main command() File "/usr/lib/python3.6/site-packages/compose/cli/main.py", line 121, in perform_command handler(command, command_options) File "/usr/lib/python3.6/site-packages/compose/cli/main.py", line 517, in images repo_tags = image_config['RepoTags'][0].rsplit(':', 1) IndexError: list index out of range Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: [bug] CMakeDeps generator: component and package with the same name Hi! During refactoring #8971 behavior of `tvalue` [macro](https://github.com/conan-io/conan/blob/80e99ca9a7d730e95adbc8bde5aa33da4f4fbb44/conan/tools/cmake/cmakedeps/templates/target_configuration.py#L35) was changed by adding some special case when `pkg_name` and `comp_name` are the same. It accidentally break this case, because `tvalue` macro is inlined in declaration of several variables (see [this](https://github.com/conan-io/conan/blob/80e99ca9a7d730e95adbc8bde5aa33da4f4fbb44/conan/tools/cmake/cmakedeps/templates/target_configuration.py#L98) for example). So these variables have one name (`{pkg_name}_{comp_name}_...`) during setting and the other name (`{comp_name}_...`) during using it in `set_property`. cc @lasote Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: TypeError on completions using version "8.6.0" I was using `IPCompleter.merge_completions = False` configuration, and after update to version `8.6.0` I got an error. I created a fresh virtual environment: ``` poetry init poetry add ipython ``` and still got the error: ``` Traceback (most recent call last): File "/tmp/foobar/.venv/lib/python3.10/site-packages/IPython/terminal/ptutils.py", line 122, in get_completions yield from self._get_completions(body, offset, cursor_position, self.ipy_completer) File "/tmp/foobar/.venv/lib/python3.10/site-packages/IPython/terminal/ptutils.py", line 138, in _get_completions for c in completions: File "/tmp/foobar/.venv/lib/python3.10/site-packages/IPython/core/completer.py", line 753, in _deduplicate_completions completions = list(completions) File "/tmp/foobar/.venv/lib/python3.10/site-packages/IPython/core/completer.py", line 2449, in completions for c in self._completions(text, offset, _timeout=self.jedi_compute_type_timeout/1000): File "/tmp/foobar/.venv/lib/python3.10/site-packages/IPython/core/completer.py", line 2499, in _completions results = self._complete( File "/tmp/foobar/.venv/lib/python3.10/site-packages/IPython/core/completer.py", line 2810, in _complete ) and len(result["completions"]) TypeError: object of type 'filter' has no len() ``` In the [documentation](https://ipython.readthedocs.io/en/stable/config/options/terminal.html) I read that as of version `8.6.0`, setting `IPCompleter.merge_completions` to False is an alias for: `IPCompleter.suppress_competing_matchers = True`. I used the new option and the error still happens. After commented this line (to use the default value) the error stopped to happen. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: ERROR: for nginx 'NoneType' object has no attribute 'get' ``` ➜ projectname docker-compose -v docker-compose version 1.18.0, build 8dd22a9 ``` Having a strange problem when simply changing a volume's mount name. My configuration looks like this: ```yaml version: '3.4' services: cygnetise: image: someorg/projectname volumes: - type: volume source: projectname_client target: /app nginx: image: someorg/projectname-nginx ports: - target: 80 published: 8080 volumes: - type: volume source: projectname_client target: /mnt/projectname_client read_only: true volumes: projectname_client: projectname_admin: ``` If I change the nginx application's target location to ``` /home/app/projectname_client``` I get the following error: ``` ➜ projectname docker-compose -f docker-compose.local.yml up Recreating 12396073747d_projectname_nginx_1 ... projectname_projectname_1 is up-to-date ERROR: for 12396073747d_projectname_nginx_1 'NoneType' object has no attribute 'get' ERROR: for nginx 'NoneType' object has no attribute 'get' Traceback (most recent call last): File "docker-compose", line 6, in <module> File "compose/cli/main.py", line 71, in main File "compose/cli/main.py", line 124, in perform_command File "compose/cli/main.py", line 959, in up File "compose/project.py", line 479, in up File "compose/parallel.py", line 80, in parallel_execute AttributeError: 'NoneType' object has no attribute 'get' Failed to execute script docker-compose ``` Not sure why this would happen, and the error message doesn't really provide any useful pointers unfortunately. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: `Stabilizer.expectation_value()` does not give the correct result ### Environment - **Qiskit Terra version**: 0.19.1 - **Python version**: 3.9.5 - **Operating system**: Win 10 ### What is happening? I wrote a script for generating random Clifford circuit with respect to certain layout. Then I convert it to `StabilizerState` and compute the expectation value of its stabilizers with `StabilizerState.expectation_value()`, which should be one. The stabilizers are obtained with `StabilizerState.clifford.to_dict()`. But some expectation values are zero, instead of one. ### How can we reproduce the issue? The following code can be used to reproduce the issue. ```python from qiskit.quantum_info import Pauli, random_clifford, StabilizerState from qiskit import QuantumCircuit from numpy.random import RandomState n_qubits = 3 circ = QuantumCircuit(n_qubits) compute_seed = RandomState(0).choice(10, size = (1, n_qubits)) for i in range(n_qubits): gate = random_clifford(1, compute_seed[0, i]) circ.compose(gate.to_circuit(), [i], inplace = True) print(circ) s = StabilizerState(circ) stab_gen = s.clifford.to_dict()["stabilizer"] print(stab_gen) for i in range(n_qubits): print(s.expectation_value(Pauli(stab_gen[i]))) # should be 1 ``` The printed result of last line is ```python 1 1 0 ``` ### What should happen? The values should all be one. Actually, if we run the following code ```python stab_sim = Aer.get_backend("aer_simulator_stabilizer") for i in range(3): circ.save_expectation_value(Pauli(stab_gen[i]), circ.qubits) result = execute(circ, stab_sim).result() print(result.data(circ)) circ.data.pop(-1) ``` Then, the printed results are all `{'expectation_value': 1.0}`. ### Any suggestions? _No response_ Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: DISCUSSION: Do we need ACL lazy loading? Is there a good reason for the [lazy](https://github.com/GoogleCloudPlatform/gcloud-python/blob/d51f29f39832d52a24b2b5dfdb4f882bf623f374/gcloud/storage/blob.py#L95-L99) loading [behavior](https://github.com/GoogleCloudPlatform/gcloud-python/blob/d51f29f39832d52a24b2b5dfdb4f882bf623f374/gcloud/storage/bucket.py#L127-L139), e.g. ``` python if self._acl is None: self._acl = ObjectACL(self) ``` This doesn't make any requests and just initializes a very lightweight object. I move to just create these in the constructor. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Cloud PR references Core See https://github.com/PrefectHQ/cloud/pull/1044 for more details Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the numpy/numpy codebase. Here's the problem: f2py: external functions declared in single line don't work External functions (e.g. #14919 or https://stackoverflow.com/questions/44073679/errors-when-using-a-fortran-call-back-function-in-f2py) do not generate correct headers in f2py if declared in F90 style. ### Reproducing code example: Version A: two lines for external ```fortran subroutine a(fcn) implicit none external fcn real(8) :: fcn real(8) :: x, y x = 0d0 y = fcn(x) end ``` Version B: one line for external ```fortran subroutine a(fcn) implicit none real(8), external :: fcn real(8) :: x, y x = 0d0 y = fcn(x) end ``` ### Output: Running `f2py source.f90 -h header.pyf` produces the following results. Version a correctly outputs a pyf header ```fortran ! -*- f90 -*- ! Note: the context of this file is case sensitive. python module a__user__routines interface a_user_interface function fcn(x) result (y) ! in external1.f90:a:unknown_interface real(kind=8) :: x real(kind=8) :: y end function fcn end interface a_user_interface end python module a__user__routines subroutine a(fcn) ! in external1.f90 use a__user__routines external fcn end subroutine a ! This file was auto-generated with f2py (version:2). ! See http://cens.ioc.ee/projects/f2py2e/ ``` Version B incorrectly produces a header without external function ```fortran ! -*- f90 -*- ! Note: the context of this file is case sensitive. subroutine b(fcn) ! in external2.f90 real(kind=8) :: fcn end subroutine b ! This file was auto-generated with f2py (version:2). ! See http://cens.ioc.ee/projects/f2py2e/ ``` ### NumPy/Python version information: 1.19.4 3.9.0 (default, Oct 27 2020, 14:15:17) [Clang 12.0.0 (clang-1200.0.32.21)] Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: firestore.CreateIfMissingOption should be replaced Paraphrased from @samtstern: It's still possible to do ```python city_ref.update({ u'capital': True }, firestore.CreateIfMissingOption(True)) ``` The other Firestore SDKs have removed this option and moved to an option on the `set()` operation called, `merge()`. For example, in the Android SDK: ```java db.collection("cities").document("BJ") .set(data, SetOptions.merge()); ``` The new semantics make it so that the `set()` operation (and `create()` which some SDKs offer) is the only operation which can make a new document. The `merge()` option means that the data will be deep merged into any existing document, rather than just obliterating and replacing. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the apache/airflow codebase. Here's the problem: Trying to use a nonexistent pool fails silently Looking at the `pool_full()` method of `TaskInstance` (line 818 of models.py) -- if the TI has a pool specified but the pool doesn't exist in the database, it returns False (and the run continues). I think maybe if a pool was specified but doesn't exist, it should raise an error instead? After all, the point of a pool is to restrict execution and this behavior lets it go on (silently). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the numpy/numpy codebase. Here's the problem: BUG? anything is allowed to cast to structured dtypes? I found while writing a ufunc that takes structured dtypes for its inputs that casting of essentially everything is allowed to a structured dtype, which is surprising. This is reflected in `can_cast`: ``` np.can_cast('f8', 'u1') # False np.can_cast('f8', '2u1') # True ``` I would have expected, at least for `safe`, that casting would only be allowed if the dtypes were the same (or, perhaps, that `can_cast` was applied recursively). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: `Pauli('')` confusion ### Environment - **Qiskit Terra version**: 0.23.2 - **Python version**: 3.9.7 - **Operating system**: Linux ### What is happening? I find the following code example puzzling: ```python >>> from qiskit.quantum_info import Pauli >>> Pauli("X")[[]] Pauli('') >>> Pauli('') Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/garrison/serverless/.direnv/python-3.9.7/lib/python3.9/site-packages/qiskit/quantum_info/operators/symplectic/pauli.py", line 182, in __init__ base_z, base_x, base_phase = self._from_label(data) File "/home/garrison/serverless/.direnv/python-3.9.7/lib/python3.9/site-packages/qiskit/quantum_info/operators/symplectic/pauli.py", line 619, in _from_label raise QiskitError(f'Pauli string label "{label}" is not valid.') qiskit.exceptions.QiskitError: 'Pauli string label "" is not valid.' ``` The first REPL line allows me to construct an object whose `__repr__` is `Pauli('')`. However, if I try to instantiate `Pauli('')` directly, it fails. ### How can we reproduce the issue? Code snippet above. ### What should happen? Either both statements should fail, or both should be allowed. ### Any suggestions? I currently see no reason not to simply support `Pauli('')`, such that it works without raising an exception. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Two qubit KAK fails for CNOT input <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: master - **Python version**: - **Operating system**: ### What is the current behavior? ``` import numpy as np from qiskit.mapper.compiling import two_qubit_kak cx = np.array([ [1,0,0,0], [0,1,0,0], [0,0,0,1], [0,0,1,0] ]) two_qubit_kak(cx) ``` ``` ~/anaconda3/lib/python3.7/site-packages/qiskit_terra-0.8.0-py3.7-macosx-10.7-x86_64.egg/qiskit/mapper/compiling.py in euler_angles_1q(unitary_matrix) 41 # Find theta 42 if abs(U[0, 0]) > small: ---> 43 theta = 2 * math.acos(abs(U[0, 0])) 44 else: 45 theta = 2 * math.asin(abs(U[1, 0])) ValueError: math domain error ``` ### Steps to reproduce the problem ### What is the expected behavior? ### Suggested solutions This may be fixed by moving to quaternions `qiskit.quantum_info.operators.quaternions` rather than Euler angles Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Update docs introduction Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: Calling a jit'd function with or without kwarg name has different behavior Consider this example: ```python def foo(x, foo_power=10): # ... jit_foo = jax.jit(foo) jit_foo(x, foo_power=11) jit_foo(x, 11) ``` It would be reasonable to expect the two calls to jit_foo to have the same behavior/semantics. However, the first call with the kwarg name included will treat foo_power as a static arg, whereas the second call will treat it as a dynamic arg. This can cause errors if foo expects foo_power to be a compile-time constant (I ran into this jitting the fft method I'm working on). A workaround is to always include kwargs in the static_argnums argument to jit. We might wanna consider doing this automatically in jit to have more predictable behavior by default. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: gcloud.datastore.connection should inherit from gcloud.connection The only [generic](https://github.com/dhermes/gcloud-python/blob/4c7fa75d7892e8b70281b722953f43f39711eea8/gcloud/connection.py#L28) [methods](https://github.com/dhermes/gcloud-python/blob/4c7fa75d7892e8b70281b722953f43f39711eea8/gcloud/connection.py#L32) in `gcloud.connection` are [identically](https://github.com/dhermes/gcloud-python/blob/4c7fa75d7892e8b70281b722953f43f39711eea8/gcloud/datastore/connection.py#L37) [defined](https://github.com/dhermes/gcloud-python/blob/4c7fa75d7892e8b70281b722953f43f39711eea8/gcloud/datastore/connection.py#L41) in `gcloud.datastore.connection`. I was adding a module docstring to `gcloud/connection.py` when I realized only one of our two implementations inherits from it. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: ninja/cmake issue when importing large subproject **Describe the bug** I am using meson to compile a complicated project. Part of this project involves sharing C++ source between my x86 spec PC and an ESP32 micro-controller. When I attempt to connect the ESP32 SDK's cmake project to my meson project as a subproject, ninja stops with error: `ERROR: Multiple producers for Ninja target "subprojects/esp32/55ac3a2@@cm_mbedcrypto@sta/bignum.c.o". Please rename your targets.` **To Reproduce** You'll need the ESP-IDF toolchain, setup guide here: https://docs.espressif.com/projects/esp-idf/en/latest/esp32/get-started/ I've created an example repo with a trivial ESP32 main implementation as an example here: https://github.com/Michael-Densberger/meson_esp32_issue_example **Expected behavior** I expected that the cmake subproject would build and I could use custom meson targets to interact with the idf.py wrapper that is used by the ESP-IDF toolchain to manage the micro-controller. Indeed, calling `idf.py flash monitor` from the subproject/esp32 dir results in a compiling and running binary on my ESP32 micro-controller. To clarify: 1. using cmake through the idf.py wrapper: works with no issues. 2. using cmake through meson results in: `ERROR: Multiple producers for Ninja target "subprojects/esp32/55ac3a2@@cm_mbedcrypto@sta/bignum.c.o". Please rename your targets.` **system parameters** * Native build * An as of this morning up-to-date Arch Linux * Python 3.8.2 * Meson 0.54.0 * Ninja 1.10.0 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: ELECTRA - some weights are not loaded ## Environment info - `transformers` version: 3.3.1 - Platform: Linux-4.15.0-118-generic-x86_64-with-Ubuntu-18.04-bionic - Python version: 3.6.9 - PyTorch version (GPU?): 1.5.1 (True) - Tensorflow version (GPU?): 2.3.0 (True) - Using GPU in script?: No - Using distributed or parallel set-up in script?: No ### Who can help albert, bert, GPT2, XLM: @LysandreJik Model Cards: @julien-c ## Information Model I am using: ELECTRA I am getting a warning: > Some weights of the model checkpoint at google/electra-large-discriminator were not used when initializing ElectraModel: ['electra.embeddings_project.weight', 'electra.embeddings_project.bias'] > - This IS expected if you are initializing ElectraModel from the checkpoint of a model trained on another task or with another architecture (e.g. initializing a BertForSequenceClassification model from a BertForPretraining model). > - This IS NOT expected if you are initializing ElectraModel from the checkpoint of a model that you expect to be exactly identical (initializing a BertForSequenceClassification model from a BertForSequenceClassification model). when using the AutoModel.from_pretrained for google/electra-base-discriminator or google/electra-large-discriminator. There is no warning for google/electra-small-discriminator. The problem remains the same when directly using the ElectraModel.from_pretrained method. ## To reproduce ``` import transformers m=transformers.AutoModel.from_pretrained("google/electra-large-discriminator") # or m=transformers.AutoModel.from_pretrained("google/electra-base-discriminator") ``` ## Expected behavior no warning Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: boost dependency static libs require static: true (instead of missing) even when dynamic libs are absent **Describe the bug** I have a Boost instance that contains only static libraries. Until v 0.54.0, the boost dependency would find them without requiring me to specify `static: true`. **To Reproduce** Call a boost dependency for a module against a Boost installation without dynamic libraries. Don't use the `static` keyword. The dependency will fail to locate the static library. **Expected behavior** As long as I don't specify a static keyword, the boost dependency should first search for dynamic libraries, and then search for static libraries. If I don't care whether I match static or dynamic, I should be able to pick up static libraries if dynamic libs don't exist. If this expected behavior is wrong, then update the dependency documentation to describe the default behavior and rationale for when a dependency static keyword is missing. **system parameters** v 0.54.0, 0.54.1 Thanks! Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the numpy/numpy codebase. Here's the problem: MAINT: ignore `.hypothesis/` <!-- Please be sure you are following the instructions in the dev guidelines http://www.numpy.org/devdocs/dev/development_workflow.html --> <!-- We'd appreciate it if your commit message is properly formatted http://www.numpy.org/devdocs/dev/development_workflow.html#writing-the-commit-message --> I ran the test using `np.test()`. Then the `.hypothesis` directory was created. This seems to a byproduct of the test. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Wrap target directory not checked No check is performed on the target directory for `wrap` files. Necessary `subdir()` checks are applied too late in process. Initial clone can lead to `out-of-tree` directory creation in arbitrary location. Large amounts of data may be downloaded to unusable location. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Restore level 1 layout/routing default to `SabreSwap` ### What should we add? Part of #9417. Depends on: - #9419 - #9421 In #8830 we had to revert optimisation level 1 to use its legacy behaviour of laying out with `DenseLayout` and routing with `StochasticSwap` if the circuit was a control-flow circuit, since the new default `SabreSwap` couldn't handle the control-flow. Once `SabreSwap` supports control-flow, we should remove this switching logic, and swap back to the preferred router. `SabreLayout` should be easier to upgrade to initial support of control-flow (especially since it'll technically already run, it'll just not have good output), if only the Python-space paths are upgraded. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: BigQuery Python Client v0.28.0: num_rows, schema property of a Table returning None and empty list Hi, I am using the BigQuery Python client v0.28.0 Using the bigquery client to list all tables in a dataset using method `list_dataset_tables`, I get an iterator of table references in the dataset. When I try to access the `num_rows` and `schema` properties of the Table object it returns `None` and `[]`. But when I access the table using `client.get_table()` I am able to access both the num_rows and schema properties. I am confused since both the methods return a `google.cloud.bigquery.table.Table` object but are inconsistent. ``` for table in bqclient.list_dataset_tables(dataset_ref): print(table.num_rows) print(table.schema) ``` Returns None and [] ``` table = bqclient.get_table(table) print(table.num_rows) print(table.schema) ``` Returns the number of rows and list of schemaFields Thanks Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: some tokenizer(s) don't save the updated attributes ### System Info transformers version: 4.25.0.dev0 Torch version: 1.13.0+cpu Cuda available: False Cuda version: None CuDNN version: None Number of GPUs available: 0 ### Description For `GPT2Tokenizer(Fast)`, Set `tokenizer.model_max_length` to `128` (originally `1024`), save it then reload, will give `tokenizer.model_max_length` being `1024`. ### Reproduction ```python from transformers import GPT2Tokenizer, GPT2TokenizerFast tokenizer = GPT2TokenizerFast.from_pretrained("gpt2") print(tokenizer.model_max_length) tokenizer.model_max_length = 128 print(tokenizer.model_max_length) tokenizer.save_pretrained("my-gpt2") tokenizer_loaded = GPT2TokenizerFast.from_pretrained("my-gpt2") print(tokenizer_loaded.model_max_length) ``` The output is ```bash 1024 128 1024 ``` ### Expected behavior `tokenizer_loaded.model_max_length` should be `128` in the above example. In general, the updated attribute(s) should be saved. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the PrefectHQ/prefect codebase. Here's the problem: Add KubernetesJobTask Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Add API to selective refer to outputs of custom and build targets Continuation of #891 and #1178 where we discussed how best to allow people to selectively use a single output of a `custom_target`/`build_target` in another target. We will be able to selectively install targets once #1469 is merged, so this is all that's left. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: premake generator output 'conanbuildinfo.lua' consider rename `.lua` is not an extension unique to premake, but instead a lua script file. I am currently working on a generator for another build system which uses `.lua` files, and the problem is obvious. I suggest `conanbuildinfo.premake.lua`. That's the convention I'll be using for the new generator. - [x] I've read the [CONTRIBUTING guide](https://github.com/conan-io/conan/blob/develop/.github/CONTRIBUTING.md). - [x] I've specified the Conan version, operating system version and any tool that can be relevant. - [x] I've explained the steps to reproduce the error or the motivation/use case of the question/suggestion. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: regression with string escaping/formatting and cc.run() #3169 seems to have caused a regression with the GLib meson build, which does the following thing (simplified): ``` templ = ''' #include<stdio.h> int main(int argc, char **argv) { printf("%d\n", (int)@0@); return 0; }''' value_FOO = cc.run(templ.format('FOO'), name : 'FOO value').stdout().strip() ``` Let's ignore for now that this is not cross-compile friendly and should be using `cc.compute_int()` or such instead. Since the above commit 36aab0f4b2a05a1ae4c8603e57b4c3c684fe8ea8 this now fails with `Checking if "POLLIN value" runs: DID NOT COMPILE` The reason this fails to compile is because the code to be compiled is now (excerpt from log file): ``` Code: #include<stdio.h> int main(int argc, char **argv) { printf("%d ", (int)FOO); return 0; } Compiler stdout: Compiler stderr: /tmp/tmpguawnoj0/testfile.c: In function ‘main’: /tmp/tmpguawnoj0/testfile.c:5:10: warning: missing terminating " character printf("%d ``` As you can see, the `\n` in the multi-line string has been turned into an actual newline here. Before the commit, the code would have a backslash and an `n` character there instead. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: Conan create in python API doesn't keep curdir With dev-conan version. If you run `api.create(...)` the `curdir` is changed. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Missing tweedledum as required package <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: 0.17.0 - **Python version**: 3.8.8 - **Operating system**: linux ### What is the current behavior? `qiskit.circuit.classicalfunction.BooleanExpression` fails with message that the `tweedledum` library is required. However, `tweedledum` is not listed a requirement for the `qiskit-terra` package. ### Steps to reproduce the problem Use API's that instantiate the `BooleanExpression` class. E.g. ``` from qiskit.circuit.library import PhaseOracle oracle = PhaseOracle('x & ~y') ``` Leads to error: ``` Traceback (most recent call last): File "<ipython-input-97-28069418327a>", line 3, in <module> oracle = PhaseOracle('x & ~y') # previous API: qiskit.aqua.components.oracles.LogicalExpressionOracle File "/opt/conda/lib/python3.8/site-packages/qiskit/circuit/library/phase_oracle.py", line 55, in __init__ expression = BooleanExpression(expression) File "/opt/conda/lib/python3.8/site-packages/qiskit/circuit/classicalfunction/boolean_expression.py", line 39, in __init__ raise MissingOptionalLibraryError( MissingOptionalLibraryError: "The 'tweedledum' library is required to use 'BooleanExpression compiler'. You can install it with 'pip install tweedledum'." ``` ### What is the expected behavior? No error about missing library should happen. ### Suggested solutions Add `tweedledum` to `./requirements.txt`. Related to #5853 and #5830 where `tweedledum` is present in `./requirements-dev.txt`, but not added to `./requirements.txt` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: MPL drawer gates overlap if plot_barriers=False <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: master - **Python version**: - **Operating system**: ### What is the current behavior? There is a `cswap` gate under the column of Hadamards <img width="553" alt="Screen Shot 2019-08-08 at 9 20 49 PM" src="https://user-images.githubusercontent.com/1249193/62747443-6f45a380-ba22-11e9-996f-34f4acf186df.png"> ### Steps to reproduce the problem ### What is the expected behavior? ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Add Working Directory # Enhancement When working with multiple projects, it would be really useful to have a --working-directory="/path/to/docker/compose/file". Fix TopLevelCommand constructor to make use of all args Fixes #4855 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the numpy/numpy codebase. Here's the problem: recfromtext bytes delimiter I had existing code that uses BytesIO and a byte delimiter. It worked in <=1.13 and breaks after. The code works if the delimiter is switched to a string. All tests were performed with Python 3.6.5 from Anaconda. The failure can be reproduced using the excerpt below. Fails using 1.14.0, 1.14.1, and 1.14.2 ``` python -c "import numpy as np; import io; print(np.version.version); data = np.recfromtxt(io.BytesIO(b'SPC:MW\nNO:30\nNO2:36'), delimiter=b':', dtype = ['S3', 'f4']); print(data)" 1.14.2 Traceback (most recent call last): File "<string>", line 1, in <module> File "/work/ROMO/anaconda3/envs/testnp113/lib/python3.6/site-packages/numpy/lib/npyio.py", line 2230, in recfromtxt output = genfromtxt(fname, **kwargs) File "/work/ROMO/anaconda3/envs/testnp113/lib/python3.6/site-packages/numpy/lib/npyio.py", line 2116, in genfromtxt rows = np.array(data, dtype=[('', _) for _ in dtype_flat]) ValueError: could not assign tuple of length 1 to structure with 2 fields. ``` Passes with 1.13.3 ``` python -c "import numpy as np; import io; print(np.version.version); data = np.recfromtxt(io.BytesIO(b'SPC:MW\nNO:30\nNO2:36'), delimiter=b':', dtype = ['S3', 'f4']); print(data)" 1.13.3 [(b'SPC', nan) (b'NO', 30.) (b'NO2', 36.)] ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: 'Table.insert_data()' fails when schema is not loaded I tried to insert data using the google cloud python client but seem to get rows where every field has a null value. I used the [code in the latest documentation](https://googlecloudplatform.github.io/google-cloud-python/stable/bigquery-usage.html). Using Debian 7.11 with Python 2.7.3 and google-cloud-python 0.20. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Add target property to build Compose should support specifying target stage in the build definition. https://github.com/moby/moby/pull/32496 @dnephin Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conan-io/conan codebase. Here's the problem: [feature] Supporting mirrors in tools.get It would be handy if `tools.get()` could support mirrors to have fallback locations to try to download a file from if the first one fails. ### Problem My main use case for such a feature is currently linked to conan-center-index: the way to retrieve the sources today is to put link to the compressed sources in `conandata.yml`, and the `source()` method of the corresponding recipe generally consumes the data from the file as follows: ```cpp tools.get(**self.conan_data["sources"][self.version]) ``` However today I need to build `sqlite3` with a specific configuration, but www.sqlite.org is down, which means that Conan fails to retrieve the sources and my whole build is kind of blocked. If `tools.get` supported mirrors it would be possible to add a list of mirrors to the `conandata.yml` to have other locations to retrieve the sources from when the first one fails. ### Solution While it would be possible to have `tools.get()` accept a list of URLs in `filename`, I believe that it might get users confused and think that it can retrieve a list of files from the given URLs, so it would probably more sensible to add a `mirrors` parameter accepting a list of URLs. Since YAML accept lists it means that a full list of mirrors could be forwarded directly from the `conandata.yml` file too. If `tools.get()` gets a `mirrors=` parameter, then it makes sense to mirror the feature and add it to `tools.download()` too. - [x] I've read the [CONTRIBUTING guide](https://github.com/conan-io/conan/blob/develop/.github/CONTRIBUTING.md). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Include a copy method for QuantumCircuit <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? This code is often repeated a lot: ``` import copy qc_copy = copy.deepcopy(qc) ``` It would be nice if there was a `copy()` method for `QuantumCircuit` that did this for you. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: meson can't find dependency via cmake Digging through the log files, I found out cmake failed with: ``` CMake Error at /usr/share/cmake-3.14/Modules/CheckIncludeFile.cmake:93 (try_compile): Unknown extension ".c" for file [snip]/meson-private/cmake_prometheus-cpp/CMakeFiles/CMakeTmp/CheckIncludeFile.c try_compile() works only for enabled languages. Currently these are: C CXX See project() command to enable other languages. ``` Which is a really absurd error. Going into the mentioned directory then run cmake manually works. meson version is 0.51.0 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the google/jax codebase. Here's the problem: numpy fft not yet implemented As a fairly fundamental operation I was surprised to find out this wasn't implemented. NotImplementedError: Numpy function <function fft at 0x7fdb56275510> not yet implemented In the short term is there a suggested workaround? I suppose I could use a full dft matrix. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Measures conditioned on register containing the target bit generate an invalid DAG When attempting to condition a `measure` on the register containing the target bit: ``` >>> qc = qk.QuantumCircuit(1,1) >>> qc.measure(0,0).c_if(qc.cregs[0],0) >>> qc.depth() 1 >>> qk.converters.circuit_to_dag(qc).depth() Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/Users/kevin.krsulichibm.com/q/qiskit-terra/qiskit/dagcircuit/dagcircuit.py", line 574, in depth raise DAGCircuitError("not a DAG") qiskit.dagcircuit.exceptions.DAGCircuitError: 'not a DAG' ``` ![image](https://user-images.githubusercontent.com/2241698/58880513-0bab9c80-86a6-11e9-85e7-802bff8954ee.png) The drawer also has difficulty with them: ``` >>> qc = qk.QuantumCircuit(1,1) >>> qc.measure(0,0).c_if(qc.cregs[0],0) >>> print(qc) q_0: |0> c_0: 0 >>> qc = qk.QuantumCircuit(2,1) >>> qc.h([0,1]) >>> qc.measure(0,0) >>> qc.measure(1,0).c_if(qc.cregs[0], 0) >>> print(qc) ┌───┐┌─┐ q_0: |0>┤ H ├┤M├ ├───┤└╥┘ q_1: |0>┤ H ├─╫─ └───┘ ║ c_0: 0 ══════╩═ ``` Conditioning a `measure` on a separate register seems to work okay ``` >>> qr = qk.QuantumRegister(2) >>> cr1 = qk.ClassicalRegister(1) >>> cr2 = qk.ClassicalRegister(1) >>> qc = qk.QuantumCircuit(qr, cr1, cr2) >>> qc.h(qr) >>> qc.measure(qr[0], cr1[0]) >>> qc.measure(qr[1], cr2[0]).c_if(cr1, 0) >>> qc.depth() 3 >>> qk.converters.circuit_to_dag(qc).depth() 3 >>> print(qc) ┌───┐┌─┐ q3_0: |0>┤ H ├┤M├─────── ├───┤└╥┘ ┌─┐ q3_1: |0>┤ H ├─╫───┤M├── └───┘ ║ ┌─┴┴┴─┐ c2_0: 0 ══════╩═╡ = 0 ╞ └──║──┘ c3_0: 0 ═══════════╩═══ ``` ![image](https://user-images.githubusercontent.com/2241698/58881003-39ddac00-86a7-11e9-95b0-ba20623dd2de.png) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Allow PyYAML >= 5 The PyYAML team recently released version 5.1 of their lib to properly fix CVE-2017-18342 vulnerability. It would be great to add support for this version in docker-compose. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the DataDog/integrations-core codebase. Here's the problem: Add SLM metrics ### What does this PR do? <!-- A brief description of the change being made with this pull request. --> Add metrics about snapshot lifecycle management, available since 7.4.0 ### Motivation <!-- What inspired you to submit this pull request? --> Resolve #8178 ### Additional Notes <!-- Anything else we should know when reviewing? --> ``` elasticsearch.slm.snapshot_deletion_failures elasticsearch.slm.snapshots_deleted elasticsearch.slm.snapshots_failed elasticsearch.slm.snapshots_taken ``` ### Review checklist (to be filled by reviewers) - [ ] Feature or bugfix MUST have appropriate tests (unit, integration, e2e) - [ ] PR title must be written as a CHANGELOG entry [(see why)](https://github.com/DataDog/integrations-core/blob/master/CONTRIBUTING.md#pull-request-title) - [ ] Files changes must correspond to the primary purpose of the PR as described in the title (small unrelated changes should have their own PR) - [ ] PR must have `changelog/` and `integration/` labels attached Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: IPythonLexer test failure with pygments 2.1 Jenkins is showing us a test failure on Windows: https://jenkins.jupyter.org/job/windows-multi/_pyversion=3.5,label=windows/504/testReport/ It looks like `$HOME` is unexpectedly being split into two tokens. I suspect it's failing since pygments 2.1 was released. I see the same locally on Linux, but it's not failing on Travis (maybe we're not installing pygments so those tests are skipped?). @abalkin and @chebee7i have done the most signficant work on the lexer machinery. Any ideas? Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: Improve coverage of the documentation Currently, some public classes are not documented anywhere because we didn't create the corresponding doc pages. Those missing pages are: - Benchmark classes - Bert Japanese - Data collators If someone feels like working on one of those, please tag yourself with a comment on this issue. Once the objects are properly documented, they can be removed from the `SHOULD_BE_DOCUMENTED` constant in [this file](https://github.com/huggingface/transformers/blob/1310e1a758edc8e89ec363db76863c771fbeb1de/utils/check_repo.py#L374). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Schedules should support parameters <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected enhancement? Pulse schedules should support parameters that allow parameterization of the schedule outside of timing. This would allow `schedule` to consume the `Parameter`s of a `QuantumCircuit` and produce a `Schedule` containing these `Parameter`s which could later be fixed. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Draw schedules with parameters <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: - **Python version**: - **Operating system**: ### What is the current behavior? Drawing `Schedule`s which utilize `Parameter`s raises an error. ### Steps to reproduce the problem ``` sched += Play(Gaussian(duration=128, sigma=10, amp=Parameter('amp')), DriveChannel(qubit)) sched.draw() ``` ### What is the expected behavior? Nice output, such as would be shown for quantum circuits with parameters. ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the numpy/numpy codebase. Here's the problem: Docs: is np.dtype.descr compatible with constructing a dtype? The [reference docs for dtype.descr](https://docs.scipy.org/doc/numpy/reference/generated/numpy.dtype.descr.html#numpy.dtype.descr) say: > Warning: This attribute exists specifically for `__array_interface__`, and is not a datatype description compatible with np.dtype. However, the [docs on constructing dtypes](https://docs.scipy.org/doc/numpy/reference/arrays.dtypes.html#specifying-and-constructing-data-types) describe `np.dtype()` accepting a list of 2- or 3-tuples, and explicitly say it's as used in `__array_interface__`. > `(field_name, field_dtype, field_shape), ...]` > > obj should be a list of fields where each field is described by a tuple of length 2 or 3. (Equivalent to the descr item in the `__array_interface__` attribute.) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: regression: nuisance warning for g++ clang++ the solution is probably similar to #6050 #6053 as this problem was also introduced in b1b8a7a and symptom is almost identical, but for g++ instead of gfortran. A distinct symptom from #6050 is that I do see this on g++ 9.2.0 MSYS2 on Windows, but I don't see this on Ubuntu 18.04 g++ 7.4.0. Also, with clang++ 9.0.0 on Windows I get ``` WARNING: No include directory found parsing "clang++ -xc++ -E -v -" output ``` on any trivial Meson C++ project, meson.build ```meson project('blah', 'cpp') executable('foo', 'foo.cxx') ``` foo.cxx ```c++ int main(void) { return 0; } ``` on ```sh meson setup build ``` a lot of nuisance warnings are printed like: ``` WARNING: No include directory found parsing "c++ -xc++ -E -v -" output ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: PubSub: add ack_id property accessor to subscriber Message class Version: google-cloud-pubsub 0.35.4 This is a feature request to add a property accessor for ack_id in `google.cloud.pubsub_v1.subscriber.message.Message`. Currently the `_ack_id` field is 'private', and only gets used via the `ack()` method (plus other related methods). We find it useful to log the ack ID so that we can manually ack the ID using the Google Cloud SDK (`gcloud` command line interface). This helps us get out of situations where the message is stuck in a (virtually) infinite retry loop because of some error. We can just access the 'private' field, but it doesn't seem very nice to have to do that. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Error on empty c.Session.key Adding `c.Session.key = ''` to the default (i.e. empty except for `c = get_config()`) `ipython_config.py` results in the following error when starting `ipython console`: ``` [ZMQTerminalIPythonApp] CRITICAL | Bad config encountered during initialization: [ZMQTerminalIPythonApp] CRITICAL | The 'key' trait of a Session instance must be a string, but a value of '' <class 'str'> was specified. ``` I [originally](https://github.com/gibiansky/IHaskell/issues/15) opened this issue on IHaskell, but it seems to be a problem with IPython itself. Some more info: ``` {'codename': 'Work in Progress', 'commit_hash': b'6fcfc4d', 'commit_source': 'repository', 'default_encoding': 'UTF-8', 'ipython_path': '/home/koomi/ipython/IPython', 'ipython_version': '2.0.0-dev', 'os_name': 'posix', 'platform': 'Linux-3.11.5-1-ARCH-x86_64-with-arch', 'sys_executable': '/usr/bin/python', 'sys_platform': 'linux', 'sys_version': '3.3.2 (default, Sep 6 2013, 09:30:10) \n[GCC 4.8.1 20130725 (prerelease)]'} ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the numpy/numpy codebase. Here's the problem: high-level documentation for __array_function__ missing This was noted in the tracking issue (gh-12028) but didn't have its own issue. I wanted to refer to these docs today and found them missing. Documentation is needed in two places: - [x] https://www.numpy.org/devdocs/reference/arrays.classes.html#special-attributes-and-methods - [x] https://www.numpy.org/devdocs/user/basics.subclassing.html A bigger-picture issue is that the subclassing doc nor other docs really discuss the issues with subclassing, and when it would be more appropriate to implement a duck array instead. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the huggingface/transformers codebase. Here's the problem: MultiBerts in Huggingface # 🚀 Feature request It would be nice to have a script/converter of all the [multiberts](https://arxiv.org/pdf/2106.16163.pdf) checkpoints that were released about a month ago. It was [released](https://github.com/google-research/language/tree/master/language/multiberts) by Google, thus using tensorflow, and it would be nice to have it under the huggingface library/hub. <!-- A clear and concise description of the feature proposal. Please provide a link to the paper and code in case they exist. --> ## Motivation <!-- Please outline the motivation for the proposal. Is your feature request related to a problem? e.g., I'm always frustrated when [...]. If this is related to another GitHub issue, please link here too. --> These checkpoints may be useful to study training dynamics and hypotheses over multiple seeds that were used to train the model. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Lightning-AI/lightning codebase. Here's the problem: Fix/test pass overrides Fixes #909 I've added a test too, let me know if it's unnecessary. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: Non-IPython kernel get passed --profile-dir Which (can) make them crash. - Either document it - remove it and deal with it. Proposal, special key like `{connexion_file}` so that it is not mandatory and not included by default. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the ipython/ipython codebase. Here's the problem: TypeError in bootstrap-tour.min.js Two minor issues: 1. When pressing `cursor left` in edit mode on current master I get: ``` TypeError: c is undefined ...ame+"_"+a,this._options.storage.removeItem(b),this._options.afterRemoveState(b))... ``` in `http://127.0.0.1:8889/static/components/bootstrap-tour/build/js/bootstrap-tour.min.js` 1. Also, `bootstrap-tour.min.css` isn't copied during installation (the .js file is). Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Gates are not left justified in mpl circuit drawer <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: master - **Python version**: - **Operating system**: ### What is the current behavior? There is always a space on the line between the qubit label and the first gate: ![circ_color](https://user-images.githubusercontent.com/1249193/61219110-7dcdc300-a6e1-11e9-9653-5b6851a34f93.png) To reduce the width of the figure as much as possible, the gates should be drawn as far left as possible. ### Steps to reproduce the problem ### What is the expected behavior? ### Suggested solutions Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the celery/celery codebase. Here's the problem: [BUG] Exception on single task in group. ## Checklist ``` // I have included the output of ``celery -A proj report`` in the issue. // (if you are not able to do this, then at least specify the Celery // version affected). // // Doesn't make sense as it client-side issue. ``` - [x] I have verified that the issue exists against the `master` branch of Celery. ## Steps to reproduce On client send a group with single task in it ```python3.6 def fta_add_to_pool(applications_id: List[int]): return group( *[ app.signature('fta_tasks.add_to_pool', args=[application_id]) for application_id in applications_id ] ).apply_async().get() ``` ## Expected behavior I expected group to execute with a single task like there was no group. ## Actual behavior Exception: ``` File "***/src/celery/celery/canvas.py", line 976, in apply_async app = self.app File "***/src/celery/celery/canvas.py", line 1140, in app app = self.tasks[0].app File "***/src/celery/celery/utils/functional.py", line 213, in __getitem__ self.__consumed.append(next(self.__it)) TypeError: 'Signature' object is not an iterator``` ``` ## Comment It should be easy to fix but I'm not sure about celery typing and etc, so I decided to make the issue. https://github.com/celery/celery/blob/39d86e7dbe7f3a0a43e973910be880146de96fb7/celery/canvas.py#L948-L958 We just need to check if this single task is Task and not something else. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the mesonbuild/meson codebase. Here's the problem: Standardize format of locations in warnings and errors for the benefit of IDEs In https://github.com/mesonbuild/meson/pull/2852#issuecomment-354570111, @QuLogic wrote: > We should make these more standard at some point. Something like `<file>:<line>: message`; I think editors know how to parse this sort of thing to go straight to the warning/error. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the jupyterlab/jupyterlab codebase. Here's the problem: `jupyterlab extension list` outputs to stderr **Describe the bug** The bash command `jupyterlab extension list` outputs by default to stderr. **To Reproduce** Steps to reproduce the behavior: 1. Go to terminal 2. Type `jupyterlab extension list` 3. Confirm exit code with `echo $?`. This should be `0`, aka a-ok. 4. Type `jupyterlab extension list 1>stdout 2>stderr` 5. Check file content of `stdout` and `stderr`. `stdout` is empty, while `stderr` contains the regular output. **Expected behavior** `jupyterlab extension list` should output to `stdout`, not `stderr`. **Desktop (please complete the following information):** - OS: Ubuntu 18.04 - JupyterLab v.0.35.4 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Move gcloud.storage.iterator into gcloud's common package We'll need this for Cloud DNS in the ManagedZones.list method (https://developers.google.com/cloud-dns/api/v1beta1/managedZones/list) Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the conda/conda codebase. Here's the problem: Basic access authentification channels broken in 4.1.0 Previously it was possible to have a channel like: https://user:password@myserver.com or even have the user and password saved in `.netrc`. conda 4.1.0 and up ignore the credentials and give a 401 error (causing everything to break for users). ``` $ conda install conda=4.1.0 Using Anaconda Cloud api site https://api.anaconda.org Fetching package metadata ...........Error: HTTPError: 401 Client Error: Unauthorized for url:https://user:password@myserver.com ``` conda=4.1 no longer respects HTTP_PROXY My proxy variables are properly set: ``` $ set https_proxy HTTPS_PROXY=http://myproxy:8080 ``` `conda=4.0.8` successfully picks up my `%HTTPS_PROXY%` and installs `conda=4.1`: ``` $ conda install conda=4.1 Fetching package metadata: .......... Solving package specifications: ......... The following packages will be UPDATED: conda: 4.0.8-py27_0 defaults --> 4.1.0-py27_0 defaults ``` now trying to revert back to `conda=4.0`: ``` $ conda install conda=4.0 Fetching package metadata ......... Could not connect to https://repo.continuum.io/pkgs/free/win-64/ Connection error: HTTPSConnectionPool(host='repo.continuum.io', port=443): Max retries exceeded with url... ``` proxy settings no longer work. Configuring `proxy_servers` in `.condarc` restores connectivity. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the docker/compose codebase. Here's the problem: Improve validation schema for list_or_dict fields Right now `extra_hosts` and `labels` use "one of: object or array", but no validation is done on the contents of the `object`. I think this can be improved by creating a schema for the object that uses `patternProperties`, so that it will fail if someone uses nested objects, or arrays within the object. ``` json { "type": "object", "patternProperties": {"type": "string"}, } ``` Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: load_qasm example should use the quantumcircuit <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues to confirm this idea does not exist. --> ### What is the expected behavior? Need to update the load_qasm with the new from file qasm load. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: backend_overview() returns deprecation warning <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: 0.11.0 - **Python version**: 3.7 - **Operating system**: macOS 10.14.5 ### What is the current behavior? The following code returns a deprecation warning before listing a backend overview: ``` from qiskit.tools.monitor import backend_overview backend_overview() ``` ``` DeprecationWarning: IBMQ.backends() is being deprecated. Please use IBMQ.get_provider() to retrieve a provider and AccountProvider.backends() to find its backends. DeprecationWarning) ``` ### Steps to reproduce the problem Run `backend_overview()` ### What is the expected behavior? A backend overview with no deprecation warning because I didn't call `IBMQ.backends()` explicitly. The issue arises because `tools/monitor/backend_monitor.py` uses `IBMQ.backends()` in the function `get_unique_backends()` to get all the backends for which to show the overview. ### Suggested solutions Update `tools/monitor/backend_monitor.py` to account for providers. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Core: Make the Retry objects complete "exactly" at deadline In the [current implementation](https://github.com/googleapis/google-cloud-python/blob/58946321c7eb4059884eadd2a09cdd6b1d2604b6/api_core/google/api_core/retry.py#L193-L208), the Retry instances only check if the next delay (sleep period) happens before the deadline. If the next sleep period is long compared to the remaining time, the last retry can happen "long" after the specified deadline, which can be undesired in certain scenarios. As an API Core user I would like to have an option to mark the deadline as strict, making the Retry object to complete retrying (approximately) at the deadline, not beyond. Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the googleapis/google-cloud-python codebase. Here's the problem: Filters should support properties with leading/trailing whitespaces in the name. `.filter('property with space =', 1)` or `.filter(' property with leading and trailing spaces =', 1)` should result in the properties names not losing the trailing/leading whitespaces. More context in https://github.com/GoogleCloudPlatform/gcloud-python/pull/294#discussion_r19435184 Can you help me debug this systematically and explain your reasoning?


[System] You are an expert software debugging assistant. Help debug issues by analyzing problems systematically and providing clear, step-by-step reasoning.

[User] I'm having an issue with the Qiskit/qiskit codebase. Here's the problem: Transpile Performance Regression <!-- ⚠ If you do not respect this template, your issue will be closed --> <!-- ⚠ Make sure to browse the opened and closed issues --> ### Information - **Qiskit Terra version**: >=0.14.0 - **Python version**: Any - **Operating system**: Any ### What is the current behavior? https://github.com/Qiskit/qiskit-terra/commit/529a22b6 made some changes to how we reorder bits in stochastic swap and basic swap. These change slow down these passes about [2x slower for basic swap ](https://qiskit.github.io/qiskit/#mapping_passes.PassBenchmarks.time_basic_swap?machine=dedicated-benchmarking-softlayer-baremetal&os=Linux%204.15.0-46-generic&ram=16GB&p-n_qubits=5&p-depth=1024&commits=529a22b6)and [10-30% for stochastic swap](https://qiskit.github.io/qiskit/#mapping_passes.PassBenchmarks.time_stochastic_swap?machine=qiskit-benchmarking&os=Ubuntu%2018.04&ram=16%20GB&p-n_qubits=5&p-depth=1024&commits=529a22b6). You can also see the impact of stochastic swap for transpiles with the preset pass managers (because of stochastic swap) here: https://qiskit.github.io/qiskit/#transpiler_levels.TranspilerLevelBenchmarks.time_quantum_volume_transpile_50_x_20?machine=qiskit-benchmarking&os=Ubuntu%2018.04&ram=16%20GB&p-transpiler%20optimization%20level=1&commits=529a22b6 Can you help me debug this systematically and explain your reasoning?