Add HTML templates for medical report generator with navigation, upload, edit, and preview functionalities

- Created base template with navigation and layout structure
- Implemented upload.html for patient data and file uploads
- Developed edit.html for editing calculated metrics
- Added preview.html for displaying generated report previews
- Enhanced user experience with Tailwind CSS styling

notebooks/analysis.ipynb

@@ -766,6 +766,52 @@
     "print(f\"FAT (smoothed): {max_fat_smoothed_row['FAT_smoothed']:.3f} kcal/min\")"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "3521220f",
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "Estimated RMR from data: 1385 kcal/day\n"
+     ]
+    }
+   ],
+   "source": [
+    "# Step 1: Filter resting phase (usually lowest VO2 or MET values)\n",
+    "rest_phase = df[df['MET'] <= 1.1]  # assuming <1.1 MET means rest\n",
+    "\n",
+    "# Step 2: Compute resting metabolic rate\n",
+    "rmr = rest_phase['EE(kcal/day)'].mean()\n",
+    "\n",
+    "print(f\"Estimated RMR from data: {rmr:.0f} kcal/day\")\n"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "524e4cba",
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "Resting phase fuel mix: Fats 32.9%, Carbs 67.1%\n"
+     ]
+    }
+   ],
+   "source": [
+    "rest_phase = df[df['RER'] == 0.9]  # filter rest data\n",
+    "fat_rest = rest_phase['FAT(%)'].mean()\n",
+    "carb_rest = rest_phase['CARBS(%)'].mean()\n",
+    "\n",
+    "print(f\"Resting phase fuel mix: Fats {fat_rest:.1f}%, Carbs {carb_rest:.1f}%\")\n"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,